Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SLX4Q8IY92 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SLX4Q8IY92 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC20.84■□□□□ 0.93
SLX4Q8IY92 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLX4Q8IY92 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC20.84■□□□□ 0.93
SLX4Q8IY92 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLX4Q8IY92 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20.84■□□□□ 0.93
SLX4Q8IY92 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLX4Q8IY92 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLX4Q8IY92 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.84■□□□□ 0.93
SLX4Q8IY92 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLX4Q8IY92 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLX4Q8IY92 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
SLX4Q8IY92 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.83■□□□□ 0.93
SLX4Q8IY92 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SLX4Q8IY92 MIR346-201ENST00000362234 95 ntBASIC20.83■□□□□ 0.93
SLX4Q8IY92 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLX4Q8IY92 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.83■□□□□ 0.93
SLX4Q8IY92 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.83■□□□□ 0.93
SLX4Q8IY92 MIR6752-201ENST00000618442 71 ntBASIC20.83■□□□□ 0.93
SLX4Q8IY92 IGHV3-72-202ENST00000621503 303 ntBASIC20.83■□□□□ 0.93
SLX4Q8IY92 LINC01451-201ENST00000623792 534 ntBASIC20.83■□□□□ 0.93
SLX4Q8IY92 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLX4Q8IY92 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.83■□□□□ 0.93
SLX4Q8IY92 AC016027.1-202ENST00000607927 1699 ntBASIC20.83■□□□□ 0.93
SLX4Q8IY92 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLX4Q8IY92 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.83■□□□□ 0.92
SLX4Q8IY92 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLX4Q8IY92 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.92
SLX4Q8IY92 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLX4Q8IY92 U91328.1-201ENST00000437528 223 ntBASIC20.83■□□□□ 0.92
SLX4Q8IY92 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC20.83■□□□□ 0.92
SLX4Q8IY92 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
SLX4Q8IY92 COQ4-205ENST00000609948 956 ntTSL 2 BASIC20.83■□□□□ 0.92
SLX4Q8IY92 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLX4Q8IY92 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLX4Q8IY92 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLX4Q8IY92 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC20.82■□□□□ 0.92
SLX4Q8IY92 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLX4Q8IY92 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.82■□□□□ 0.92
SLX4Q8IY92 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLX4Q8IY92 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLX4Q8IY92 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLX4Q8IY92 HCG4-201ENST00000418983 998 ntBASIC20.82■□□□□ 0.92
SLX4Q8IY92 SPTLC1P1-201ENST00000447199 261 ntBASIC20.82■□□□□ 0.92
SLX4Q8IY92 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.82■□□□□ 0.92
SLX4Q8IY92 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.82■□□□□ 0.92
SLX4Q8IY92 AC004840.1-201ENST00000636359 365 ntBASIC20.82■□□□□ 0.92
SLX4Q8IY92 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLX4Q8IY92 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.82■□□□□ 0.92
SLX4Q8IY92 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SLX4Q8IY92 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.82■□□□□ 0.92
SLX4Q8IY92 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.82■□□□□ 0.92
SLX4Q8IY92 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SLX4Q8IY92 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLX4Q8IY92 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLX4Q8IY92 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLX4Q8IY92 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLX4Q8IY92 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLX4Q8IY92 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
SLX4Q8IY92 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
SLX4Q8IY92 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.81■□□□□ 0.92
SLX4Q8IY92 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.81■□□□□ 0.92
SLX4Q8IY92 IGHV3-71-201ENST00000523324 359 ntBASIC20.81■□□□□ 0.92
SLX4Q8IY92 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLX4Q8IY92 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.81■□□□□ 0.92
SLX4Q8IY92 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SLX4Q8IY92 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.81■□□□□ 0.92
SLX4Q8IY92 AL138918.1-201ENST00000568306 659 ntBASIC20.81■□□□□ 0.92
SLX4Q8IY92 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SLX4Q8IY92 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.81■□□□□ 0.92
SLX4Q8IY92 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.81■□□□□ 0.92
SLX4Q8IY92 AP000974.1-201ENST00000623909 2387 ntBASIC20.81■□□□□ 0.92
SLX4Q8IY92 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLX4Q8IY92 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
SLX4Q8IY92 TNXA-203ENST00000507684 2038 ntBASIC20.81■□□□□ 0.92
SLX4Q8IY92 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLX4Q8IY92 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLX4Q8IY92 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLX4Q8IY92 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SLX4Q8IY92 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLX4Q8IY92 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.81■□□□□ 0.92
SLX4Q8IY92 AC142381.1-201ENST00000426099 345 ntBASIC20.81■□□□□ 0.92
SLX4Q8IY92 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC20.81■□□□□ 0.92
SLX4Q8IY92 LY6E-204ENST00000519546 971 ntTSL 2 BASIC20.81■□□□□ 0.92
SLX4Q8IY92 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.81■□□□□ 0.92
SLX4Q8IY92 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.81■□□□□ 0.92
SLX4Q8IY92 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLX4Q8IY92 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLX4Q8IY92 CU639417.3-201ENST00000624240 1404 ntBASIC20.8■□□□□ 0.92
SLX4Q8IY92 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLX4Q8IY92 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLX4Q8IY92 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLX4Q8IY92 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLX4Q8IY92 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.8■□□□□ 0.92
SLX4Q8IY92 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLX4Q8IY92 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC20.8■□□□□ 0.92
SLX4Q8IY92 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC20.8■□□□□ 0.92
SLX4Q8IY92 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLX4Q8IY92 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms