Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RTTNQ86VV8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTTNQ86VV8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTTNQ86VV8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTTNQ86VV8 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTTNQ86VV8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RTTNQ86VV8 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.32■□□□□ 0.04
RTTNQ86VV8 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.32■□□□□ 0.04
RTTNQ86VV8 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTTNQ86VV8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RTTNQ86VV8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RTTNQ86VV8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.32■□□□□ 0.04
RTTNQ86VV8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTTNQ86VV8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RTTNQ86VV8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RTTNQ86VV8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTTNQ86VV8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RTTNQ86VV8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.32■□□□□ 0.04
RTTNQ86VV8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
RTTNQ86VV8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTTNQ86VV8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTTNQ86VV8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RTTNQ86VV8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTTNQ86VV8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTTNQ86VV8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTTNQ86VV8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.32■□□□□ 0.04
RTTNQ86VV8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.32■□□□□ 0.04
RTTNQ86VV8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTTNQ86VV8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.32■□□□□ 0.04
RTTNQ86VV8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.32■□□□□ 0.04
RTTNQ86VV8 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
RTTNQ86VV8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.32■□□□□ 0.04
RTTNQ86VV8 AC091304.2-201ENST00000564639 760 ntBASIC15.32■□□□□ 0.04
RTTNQ86VV8 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
RTTNQ86VV8 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RTTNQ86VV8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RTTNQ86VV8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
RTTNQ86VV8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RTTNQ86VV8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RTTNQ86VV8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RTTNQ86VV8 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTTNQ86VV8 INTS4P1-201ENST00000438455 1935 ntBASIC15.31■□□□□ 0.04
RTTNQ86VV8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
RTTNQ86VV8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.31■□□□□ 0.04
RTTNQ86VV8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RTTNQ86VV8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTTNQ86VV8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RTTNQ86VV8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RTTNQ86VV8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTTNQ86VV8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.31■□□□□ 0.04
RTTNQ86VV8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.31■□□□□ 0.04
RTTNQ86VV8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTTNQ86VV8 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTTNQ86VV8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RTTNQ86VV8 AC099398.1-201ENST00000567919 2776 ntBASIC15.31■□□□□ 0.04
RTTNQ86VV8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTTNQ86VV8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RTTNQ86VV8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTTNQ86VV8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTTNQ86VV8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.31■□□□□ 0.04
RTTNQ86VV8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTTNQ86VV8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RTTNQ86VV8 AL138688.1-201ENST00000624851 1594 ntBASIC15.31■□□□□ 0.04
RTTNQ86VV8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTTNQ86VV8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTTNQ86VV8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.31■□□□□ 0.04
RTTNQ86VV8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTTNQ86VV8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.31■□□□□ 0.04
RTTNQ86VV8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTTNQ86VV8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTTNQ86VV8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTTNQ86VV8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTTNQ86VV8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTTNQ86VV8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.31■□□□□ 0.04
RTTNQ86VV8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTTNQ86VV8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RTTNQ86VV8 FOSL1P1-201ENST00000511041 816 ntBASIC15.31■□□□□ 0.04
RTTNQ86VV8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.31■□□□□ 0.04
RTTNQ86VV8 AC010327.4-202ENST00000591484 748 ntBASIC15.31■□□□□ 0.04
RTTNQ86VV8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.31■□□□□ 0.04
RTTNQ86VV8 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.31■□□□□ 0.04
RTTNQ86VV8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTTNQ86VV8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RTTNQ86VV8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.3■□□□□ 0.04
RTTNQ86VV8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RTTNQ86VV8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.3■□□□□ 0.04
RTTNQ86VV8 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.3■□□□□ 0.04
RTTNQ86VV8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.3■□□□□ 0.04
RTTNQ86VV8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RTTNQ86VV8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RTTNQ86VV8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.3■□□□□ 0.04
RTTNQ86VV8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.3■□□□□ 0.04
RTTNQ86VV8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.3■□□□□ 0.04
RTTNQ86VV8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.3■□□□□ 0.04
RTTNQ86VV8 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
RTTNQ86VV8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RTTNQ86VV8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RTTNQ86VV8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.3■□□□□ 0.04
RTTNQ86VV8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RTTNQ86VV8 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms