Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LDB1Q86U70 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.31■□□□□ 0.36
LDB1Q86U70 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.31■□□□□ 0.36
LDB1Q86U70 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LDB1Q86U70 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LDB1Q86U70 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LDB1Q86U70 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.31■□□□□ 0.36
LDB1Q86U70 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.31■□□□□ 0.36
LDB1Q86U70 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LDB1Q86U70 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LDB1Q86U70 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LDB1Q86U70 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.31■□□□□ 0.36
LDB1Q86U70 KLF4P1-201ENST00000412782 1185 ntBASIC17.31■□□□□ 0.36
LDB1Q86U70 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LDB1Q86U70 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.31■□□□□ 0.36
LDB1Q86U70 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LDB1Q86U70 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.31■□□□□ 0.36
LDB1Q86U70 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.31■□□□□ 0.36
LDB1Q86U70 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.31■□□□□ 0.36
LDB1Q86U70 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.31■□□□□ 0.36
LDB1Q86U70 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LDB1Q86U70 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.31■□□□□ 0.36
LDB1Q86U70 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.31■□□□□ 0.36
LDB1Q86U70 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LDB1Q86U70 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.31■□□□□ 0.36
LDB1Q86U70 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LDB1Q86U70 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.31■□□□□ 0.36
LDB1Q86U70 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LDB1Q86U70 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.31■□□□□ 0.36
LDB1Q86U70 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LDB1Q86U70 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
LDB1Q86U70 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.31■□□□□ 0.36
LDB1Q86U70 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LDB1Q86U70 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.3■□□□□ 0.36
LDB1Q86U70 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LDB1Q86U70 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LDB1Q86U70 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LDB1Q86U70 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LDB1Q86U70 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.3■□□□□ 0.36
LDB1Q86U70 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
LDB1Q86U70 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LDB1Q86U70 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LDB1Q86U70 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LDB1Q86U70 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.3■□□□□ 0.36
LDB1Q86U70 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.3■□□□□ 0.36
LDB1Q86U70 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LDB1Q86U70 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LDB1Q86U70 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LDB1Q86U70 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LDB1Q86U70 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.3■□□□□ 0.36
LDB1Q86U70 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LDB1Q86U70 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LDB1Q86U70 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.3■□□□□ 0.36
LDB1Q86U70 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.3■□□□□ 0.36
LDB1Q86U70 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.3■□□□□ 0.36
LDB1Q86U70 PMPCAP1-201ENST00000508114 1576 ntBASIC17.3■□□□□ 0.36
LDB1Q86U70 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LDB1Q86U70 PRORSD1P-202ENST00000563365 2154 ntBASIC17.3■□□□□ 0.36
LDB1Q86U70 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
LDB1Q86U70 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LDB1Q86U70 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LDB1Q86U70 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
LDB1Q86U70 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LDB1Q86U70 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LDB1Q86U70 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
LDB1Q86U70 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LDB1Q86U70 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.29■□□□□ 0.36
LDB1Q86U70 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
LDB1Q86U70 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB1Q86U70 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.29■□□□□ 0.36
LDB1Q86U70 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LDB1Q86U70 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LDB1Q86U70 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB1Q86U70 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LDB1Q86U70 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB1Q86U70 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB1Q86U70 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB1Q86U70 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB1Q86U70 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.29■□□□□ 0.36
LDB1Q86U70 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB1Q86U70 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.29■□□□□ 0.36
LDB1Q86U70 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
LDB1Q86U70 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LDB1Q86U70 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.29■□□□□ 0.36
LDB1Q86U70 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB1Q86U70 AL591684.3-201ENST00000605187 298 ntBASIC17.29■□□□□ 0.36
LDB1Q86U70 AL732292.2-201ENST00000609649 430 ntBASIC17.29■□□□□ 0.36
LDB1Q86U70 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.29■□□□□ 0.36
LDB1Q86U70 AP000867.4-201ENST00000641616 219 ntBASIC17.29■□□□□ 0.36
LDB1Q86U70 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB1Q86U70 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
LDB1Q86U70 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB1Q86U70 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
LDB1Q86U70 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB1Q86U70 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB1Q86U70 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB1Q86U70 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.29■□□□□ 0.36
LDB1Q86U70 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.29■□□□□ 0.36
LDB1Q86U70 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LDB1Q86U70 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms