Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 KRT8P47-201ENST00000604727 1398 ntBASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PTCHD4Q6ZW05 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 KRT89P-201ENST00000620027 1478 ntBASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 SPDYE15P-201ENST00000424157 909 ntBASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 LINC01311-201ENST00000565162 1445 ntBASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 BX276092.7-203ENST00000637198 1536 ntBASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTCHD4Q6ZW05 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 LIN28AP1-201ENST00000429574 405 ntBASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 KRT18P65-201ENST00000439811 1286 ntBASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 ATP5G1P1-201ENST00000448724 379 ntBASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 COX11P1-201ENST00000489116 835 ntBASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTCHD4Q6ZW05 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTCHD4Q6ZW05 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms