Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 MIR7706-201ENST00000613747 67 ntBASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RFWD3Q6PCD5 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RFWD3Q6PCD5 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFWD3Q6PCD5 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFWD3Q6PCD5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.08■□□□□ 0.49
RFWD3Q6PCD5 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFWD3Q6PCD5 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFWD3Q6PCD5 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
RFWD3Q6PCD5 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RFWD3Q6PCD5 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
RFWD3Q6PCD5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RFWD3Q6PCD5 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RFWD3Q6PCD5 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RFWD3Q6PCD5 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
RFWD3Q6PCD5 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.08■□□□□ 0.49
RFWD3Q6PCD5 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFWD3Q6PCD5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.08■□□□□ 0.48
RFWD3Q6PCD5 AL020989.1-201ENST00000422979 469 ntBASIC18.08■□□□□ 0.48
RFWD3Q6PCD5 AP000347.1-202ENST00000435868 847 ntBASIC18.08■□□□□ 0.48
RFWD3Q6PCD5 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.08■□□□□ 0.48
RFWD3Q6PCD5 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.08■□□□□ 0.48
RFWD3Q6PCD5 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.08■□□□□ 0.48
RFWD3Q6PCD5 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.08■□□□□ 0.48
RFWD3Q6PCD5 STK25P1-201ENST00000585406 838 ntBASIC18.08■□□□□ 0.48
RFWD3Q6PCD5 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.08■□□□□ 0.48
RFWD3Q6PCD5 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RFWD3Q6PCD5 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFWD3Q6PCD5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFWD3Q6PCD5 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RFWD3Q6PCD5 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFWD3Q6PCD5 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RFWD3Q6PCD5 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.08■□□□□ 0.48
RFWD3Q6PCD5 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RFWD3Q6PCD5 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 SIGLEC16-201ENST00000599858 1437 ntBASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 AC243591.1-201ENST00000452967 1364 ntBASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 AC018695.7-201ENST00000624587 2492 ntBASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 SLC25A6P5-201ENST00000435663 894 ntBASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 AC002558.1-201ENST00000488906 803 ntBASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 OR7E14P-202ENST00000530490 1290 ntBASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 AL022326.1-202ENST00000641533 845 ntBASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 AL355312.1-201ENST00000407115 2176 ntBASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
RFWD3Q6PCD5 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RFWD3Q6PCD5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms