Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 AC112907.2-201ENST00000448639 330 ntBASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TMEM53Q6P2H8 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 DBET-201ENST00000630918 3363 ntBASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 KRT18P38-201ENST00000449496 1282 ntBASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 AC024563.2-201ENST00000603282 481 ntBASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 LINC01311-201ENST00000565162 1445 ntBASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.94■□□□□ 0.14
TMEM53Q6P2H8 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 AC105917.1-201ENST00000506637 2539 ntBASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 AC099343.3-201ENST00000605834 2503 ntBASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 LYSMD4-203ENST00000378904 2122 ntBASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TMEM53Q6P2H8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms