Protein–RNA interactions for Protein: Q68CR1

SEL1L3, Protein sel-1 homolog 3, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3Q68CR1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEL1L3Q68CR1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SEL1L3Q68CR1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SEL1L3Q68CR1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEL1L3Q68CR1 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEL1L3Q68CR1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.71■□□□□ 0.43
SEL1L3Q68CR1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SEL1L3Q68CR1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.71■□□□□ 0.43
SEL1L3Q68CR1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SEL1L3Q68CR1 IL9RP2-201ENST00000423948 1312 ntBASIC17.71■□□□□ 0.42
SEL1L3Q68CR1 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SEL1L3Q68CR1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.71■□□□□ 0.42
SEL1L3Q68CR1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
SEL1L3Q68CR1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 AL356309.3-201ENST00000624132 1934 ntBASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 AC243591.1-201ENST00000452967 1364 ntBASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 FAM215A-202ENST00000632077 792 ntBASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.7■□□□□ 0.42
SEL1L3Q68CR1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 AD000864.1-201ENST00000624076 2295 ntBASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 AP000867.4-201ENST00000641616 219 ntBASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SEL1L3Q68CR1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SEL1L3Q68CR1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SEL1L3Q68CR1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SEL1L3Q68CR1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SEL1L3Q68CR1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SEL1L3Q68CR1 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SEL1L3Q68CR1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
SEL1L3Q68CR1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SEL1L3Q68CR1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SEL1L3Q68CR1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.68■□□□□ 0.42
SEL1L3Q68CR1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SEL1L3Q68CR1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
SEL1L3Q68CR1 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SEL1L3Q68CR1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
SEL1L3Q68CR1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SEL1L3Q68CR1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SEL1L3Q68CR1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.68■□□□□ 0.42
SEL1L3Q68CR1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SEL1L3Q68CR1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.68■□□□□ 0.42
SEL1L3Q68CR1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SEL1L3Q68CR1 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms