Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 FAM197Y8-203ENST00000450145 560 ntBASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 AC106820.2-201ENST00000563775 3264 ntBASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 AL020989.1-201ENST00000422979 469 ntBASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 STK25P1-201ENST00000585406 838 ntBASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TTC39BQ5VTQ0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 FDX1P1-201ENST00000449115 551 ntBASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
TTC39BQ5VTQ0 AC132938.5-201ENST00000624980 1813 ntBASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms