Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 MIR718-201ENST00000390190 70 ntBASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 KRT18P48-201ENST00000434763 852 ntBASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 NAPSB-206ENST00000562112 1266 ntBASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 USP36-216ENST00000589424 970 ntTSL 5 BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 PCDHB17P-201ENST00000539533 2393 ntBASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 AL391807.1-203ENST00000604392 2365 ntBASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 AL391005.1-201ENST00000623953 2435 ntBASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC11.87□□□□□ -0.51
LINC00242Q5T6M2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 KRT8P9-201ENST00000558927 1449 ntBASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 CYP2T1P-202ENST00000641596 2535 ntBASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 MYCLP1-201ENST00000372451 1075 ntBASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 ECEL1P3-201ENST00000427961 737 ntBASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 MTCL1P1-201ENST00000446207 792 ntBASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 ECEL1P2-202ENST00000465689 757 ntBASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 CD81-212ENST00000526072 1172 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 PPOX-214ENST00000535223 664 ntTSL 3 BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 AL355075.4-201ENST00000554988 638 ntBASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 GCSHP2-201ENST00000560971 527 ntBASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 AL136038.4-201ENST00000603606 1261 ntBASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 AC010947.1-201ENST00000623454 693 ntBASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
LINC00242Q5T6M2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms