Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 SNHG9-202ENST00000564014 471 ntBASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 AC007064.4-201ENST00000637740 555 ntBASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNFT1Q5M7Z0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNFT1Q5M7Z0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RNFT1Q5M7Z0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNFT1Q5M7Z0 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNFT1Q5M7Z0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNFT1Q5M7Z0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.54■□□□□ 0.08
RNFT1Q5M7Z0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RNFT1Q5M7Z0 KRT18P28-201ENST00000453838 1332 ntBASIC15.54■□□□□ 0.08
RNFT1Q5M7Z0 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNFT1Q5M7Z0 AC254562.1-201ENST00000417586 456 ntBASIC15.54■□□□□ 0.08
RNFT1Q5M7Z0 FAM58CP-201ENST00000435741 640 ntBASIC15.54■□□□□ 0.08
RNFT1Q5M7Z0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.54■□□□□ 0.08
RNFT1Q5M7Z0 AC087163.2-201ENST00000457299 853 ntBASIC15.54■□□□□ 0.08
RNFT1Q5M7Z0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
RNFT1Q5M7Z0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.54■□□□□ 0.08
RNFT1Q5M7Z0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.54■□□□□ 0.08
RNFT1Q5M7Z0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.54■□□□□ 0.08
RNFT1Q5M7Z0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNFT1Q5M7Z0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNFT1Q5M7Z0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNFT1Q5M7Z0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNFT1Q5M7Z0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNFT1Q5M7Z0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 NEFHP1-201ENST00000412845 2629 ntBASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 CNN2P11-201ENST00000429351 262 ntBASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 AL355385.1-201ENST00000606123 409 ntBASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 AC091812.2-201ENST00000619081 385 ntBASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 AC092919.2-201ENST00000623631 1645 ntBASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RNFT1Q5M7Z0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNFT1Q5M7Z0 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.52■□□□□ 0.08
RNFT1Q5M7Z0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
RNFT1Q5M7Z0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNFT1Q5M7Z0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNFT1Q5M7Z0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNFT1Q5M7Z0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNFT1Q5M7Z0 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RNFT1Q5M7Z0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNFT1Q5M7Z0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RNFT1Q5M7Z0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.52■□□□□ 0.08
RNFT1Q5M7Z0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.52■□□□□ 0.08
RNFT1Q5M7Z0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RNFT1Q5M7Z0 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.52■□□□□ 0.08
RNFT1Q5M7Z0 HMGN1P19-201ENST00000436976 333 ntBASIC15.52■□□□□ 0.08
RNFT1Q5M7Z0 METTL21AP1-201ENST00000438852 635 ntBASIC15.52■□□□□ 0.08
RNFT1Q5M7Z0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.52■□□□□ 0.08
RNFT1Q5M7Z0 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RNFT1Q5M7Z0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.52■□□□□ 0.08
RNFT1Q5M7Z0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.52■□□□□ 0.08
RNFT1Q5M7Z0 AC092902.6-201ENST00000641783 218 ntBASIC15.52■□□□□ 0.08
RNFT1Q5M7Z0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms