Protein–RNA interactions for Protein: Q09161

NCBP1, Nuclear cap-binding protein subunit 1, humanhuman

Known RBP Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1Q09161 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.68■□□□□ 0.74
NCBP1Q09161 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCBP1Q09161 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCBP1Q09161 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NCBP1Q09161 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
NCBP1Q09161 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
NCBP1Q09161 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCBP1Q09161 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
NCBP1Q09161 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NCBP1Q09161 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NCBP1Q09161 ANKRD26P3-201ENST00000454044 2748 ntBASIC19.67■□□□□ 0.74
NCBP1Q09161 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
NCBP1Q09161 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.67■□□□□ 0.74
NCBP1Q09161 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCBP1Q09161 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCBP1Q09161 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCBP1Q09161 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCBP1Q09161 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.67■□□□□ 0.74
NCBP1Q09161 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCBP1Q09161 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCBP1Q09161 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.67■□□□□ 0.74
NCBP1Q09161 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCBP1Q09161 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NCBP1Q09161 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
NCBP1Q09161 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.67■□□□□ 0.74
NCBP1Q09161 EMBP1-201ENST00000458200 901 ntBASIC19.67■□□□□ 0.74
NCBP1Q09161 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NCBP1Q09161 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.67■□□□□ 0.74
NCBP1Q09161 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.67■□□□□ 0.74
NCBP1Q09161 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
NCBP1Q09161 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.67■□□□□ 0.74
NCBP1Q09161 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.67■□□□□ 0.74
NCBP1Q09161 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCBP1Q09161 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NCBP1Q09161 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NCBP1Q09161 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
NCBP1Q09161 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCBP1Q09161 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NCBP1Q09161 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCBP1Q09161 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCBP1Q09161 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCBP1Q09161 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NCBP1Q09161 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.67■□□□□ 0.74
NCBP1Q09161 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NCBP1Q09161 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NCBP1Q09161 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.67■□□□□ 0.74
NCBP1Q09161 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NCBP1Q09161 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCBP1Q09161 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCBP1Q09161 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NCBP1Q09161 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
NCBP1Q09161 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.66■□□□□ 0.74
NCBP1Q09161 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCBP1Q09161 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCBP1Q09161 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCBP1Q09161 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCBP1Q09161 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCBP1Q09161 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
NCBP1Q09161 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.66■□□□□ 0.74
NCBP1Q09161 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCBP1Q09161 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NCBP1Q09161 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCBP1Q09161 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.66■□□□□ 0.74
NCBP1Q09161 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.66■□□□□ 0.74
NCBP1Q09161 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.66■□□□□ 0.74
NCBP1Q09161 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.66■□□□□ 0.74
NCBP1Q09161 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.66■□□□□ 0.74
NCBP1Q09161 BNIP3P18-201ENST00000593976 575 ntBASIC19.66■□□□□ 0.74
NCBP1Q09161 AC114341.1-201ENST00000618070 349 ntBASIC19.66■□□□□ 0.74
NCBP1Q09161 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.66■□□□□ 0.74
NCBP1Q09161 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NCBP1Q09161 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.66■□□□□ 0.74
NCBP1Q09161 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCBP1Q09161 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
NCBP1Q09161 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC19.66■□□□□ 0.74
NCBP1Q09161 TP73-AS1-210ENST00000637775 1455 ntBASIC19.66■□□□□ 0.74
NCBP1Q09161 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCBP1Q09161 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NCBP1Q09161 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
NCBP1Q09161 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCBP1Q09161 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.65■□□□□ 0.74
NCBP1Q09161 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NCBP1Q09161 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCBP1Q09161 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NCBP1Q09161 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NCBP1Q09161 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NCBP1Q09161 PHGDH-209ENST00000641074 1780 ntBASIC19.65■□□□□ 0.74
NCBP1Q09161 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.65■□□□□ 0.74
NCBP1Q09161 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
NCBP1Q09161 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCBP1Q09161 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCBP1Q09161 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NCBP1Q09161 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NCBP1Q09161 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCBP1Q09161 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCBP1Q09161 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.65■□□□□ 0.74
NCBP1Q09161 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.65■□□□□ 0.74
NCBP1Q09161 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NCBP1Q09161 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.65■□□□□ 0.74
NCBP1Q09161 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms