Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.45■□□□□ 0.86
CNTNAP1P78357 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNTNAP1P78357 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNTNAP1P78357 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CNTNAP1P78357 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNTNAP1P78357 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.45■□□□□ 0.86
CNTNAP1P78357 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CNTNAP1P78357 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
CNTNAP1P78357 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNTNAP1P78357 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CNTNAP1P78357 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.45■□□□□ 0.86
CNTNAP1P78357 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CNTNAP1P78357 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CNTNAP1P78357 AC092580.3-201ENST00000430932 139 ntBASIC20.45■□□□□ 0.86
CNTNAP1P78357 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20.45■□□□□ 0.86
CNTNAP1P78357 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.45■□□□□ 0.86
CNTNAP1P78357 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC20.45■□□□□ 0.86
CNTNAP1P78357 AC107918.2-201ENST00000530817 355 ntBASIC20.45■□□□□ 0.86
CNTNAP1P78357 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC20.45■□□□□ 0.86
CNTNAP1P78357 AC243562.1-201ENST00000560672 389 ntBASIC20.45■□□□□ 0.86
CNTNAP1P78357 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CNTNAP1P78357 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.45■□□□□ 0.86
CNTNAP1P78357 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CNTNAP1P78357 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.45■□□□□ 0.86
CNTNAP1P78357 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
CNTNAP1P78357 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP1P78357 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
CNTNAP1P78357 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP1P78357 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.44■□□□□ 0.86
CNTNAP1P78357 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CNTNAP1P78357 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP1P78357 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP1P78357 MIR1909-201ENST00000411312 80 ntBASIC20.44■□□□□ 0.86
CNTNAP1P78357 SPDYE7P-202ENST00000420373 878 ntBASIC20.44■□□□□ 0.86
CNTNAP1P78357 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP1P78357 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP1P78357 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP1P78357 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.44■□□□□ 0.86
CNTNAP1P78357 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC20.44■□□□□ 0.86
CNTNAP1P78357 AC026150.2-201ENST00000564693 1156 ntBASIC20.44■□□□□ 0.86
CNTNAP1P78357 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
CNTNAP1P78357 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP1P78357 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP1P78357 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP1P78357 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP1P78357 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNTNAP1P78357 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP1P78357 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP1P78357 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP1P78357 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.43■□□□□ 0.86
CNTNAP1P78357 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP1P78357 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CNTNAP1P78357 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CNTNAP1P78357 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.43■□□□□ 0.86
CNTNAP1P78357 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.43■□□□□ 0.86
CNTNAP1P78357 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP1P78357 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP1P78357 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.43■□□□□ 0.86
CNTNAP1P78357 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP1P78357 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.43■□□□□ 0.86
CNTNAP1P78357 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP1P78357 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP1P78357 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CNTNAP1P78357 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP1P78357 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC20.43■□□□□ 0.86
CNTNAP1P78357 SPDYE14P-201ENST00000442619 822 ntBASIC20.43■□□□□ 0.86
CNTNAP1P78357 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.43■□□□□ 0.86
CNTNAP1P78357 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CNTNAP1P78357 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP1P78357 AL139327.4-201ENST00000612362 153 ntBASIC20.43■□□□□ 0.86
CNTNAP1P78357 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP1P78357 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP1P78357 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNTNAP1P78357 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.43■□□□□ 0.86
CNTNAP1P78357 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CNTNAP1P78357 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CNTNAP1P78357 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP1P78357 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP1P78357 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP1P78357 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP1P78357 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP1P78357 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CNTNAP1P78357 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CNTNAP1P78357 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.42■□□□□ 0.86
CNTNAP1P78357 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.42■□□□□ 0.86
CNTNAP1P78357 AC004233.3-201ENST00000607794 1269 ntBASIC20.42■□□□□ 0.86
CNTNAP1P78357 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.42■□□□□ 0.86
CNTNAP1P78357 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.42■□□□□ 0.86
CNTNAP1P78357 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP1P78357 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CNTNAP1P78357 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CNTNAP1P78357 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CNTNAP1P78357 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP1P78357 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
CNTNAP1P78357 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP1P78357 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP1P78357 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP1P78357 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.41■□□□□ 0.86
CNTNAP1P78357 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNTNAP1P78357 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms