Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ASIC1P78348 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
ASIC1P78348 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
ASIC1P78348 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
ASIC1P78348 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ASIC1P78348 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
ASIC1P78348 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.35■□□□□ 0.69
ASIC1P78348 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ASIC1P78348 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ASIC1P78348 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ASIC1P78348 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ASIC1P78348 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ASIC1P78348 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ASIC1P78348 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.35■□□□□ 0.69
ASIC1P78348 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.35■□□□□ 0.69
ASIC1P78348 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.35■□□□□ 0.69
ASIC1P78348 AL135999.2-201ENST00000622438 1686 ntBASIC19.35■□□□□ 0.69
ASIC1P78348 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.35■□□□□ 0.69
ASIC1P78348 AC060834.1-201ENST00000443027 2032 ntBASIC19.35■□□□□ 0.69
ASIC1P78348 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ASIC1P78348 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ASIC1P78348 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.35■□□□□ 0.69
ASIC1P78348 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.35■□□□□ 0.69
ASIC1P78348 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ASIC1P78348 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ASIC1P78348 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ASIC1P78348 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ASIC1P78348 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ASIC1P78348 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ASIC1P78348 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.34■□□□□ 0.69
ASIC1P78348 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ASIC1P78348 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ASIC1P78348 AC009053.2-201ENST00000563701 2365 ntBASIC19.34■□□□□ 0.69
ASIC1P78348 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ASIC1P78348 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.34■□□□□ 0.69
ASIC1P78348 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.34■□□□□ 0.69
ASIC1P78348 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
ASIC1P78348 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ASIC1P78348 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ASIC1P78348 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ASIC1P78348 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ASIC1P78348 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
ASIC1P78348 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.34■□□□□ 0.69
ASIC1P78348 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ASIC1P78348 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.34■□□□□ 0.69
ASIC1P78348 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ASIC1P78348 PMPCAP1-201ENST00000508114 1576 ntBASIC19.34■□□□□ 0.69
ASIC1P78348 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ASIC1P78348 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ASIC1P78348 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ASIC1P78348 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ASIC1P78348 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ASIC1P78348 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.33■□□□□ 0.69
ASIC1P78348 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
ASIC1P78348 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ASIC1P78348 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ASIC1P78348 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.33■□□□□ 0.69
ASIC1P78348 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ASIC1P78348 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
ASIC1P78348 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.33■□□□□ 0.69
ASIC1P78348 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ASIC1P78348 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
ASIC1P78348 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.33■□□□□ 0.68
ASIC1P78348 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
ASIC1P78348 HCG4P8-203ENST00000443049 980 ntBASIC19.33■□□□□ 0.68
ASIC1P78348 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ASIC1P78348 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.33■□□□□ 0.68
ASIC1P78348 MIR5100-201ENST00000579544 119 ntBASIC19.33■□□□□ 0.68
ASIC1P78348 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.33■□□□□ 0.68
ASIC1P78348 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ASIC1P78348 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.33■□□□□ 0.68
ASIC1P78348 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.33■□□□□ 0.68
ASIC1P78348 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ASIC1P78348 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ASIC1P78348 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.33■□□□□ 0.68
ASIC1P78348 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ASIC1P78348 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ASIC1P78348 LINC02012-201ENST00000608206 1725 ntBASIC19.33■□□□□ 0.68
ASIC1P78348 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ASIC1P78348 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ASIC1P78348 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ASIC1P78348 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ASIC1P78348 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ASIC1P78348 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ASIC1P78348 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ASIC1P78348 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ASIC1P78348 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.33■□□□□ 0.68
ASIC1P78348 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ASIC1P78348 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ASIC1P78348 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.32■□□□□ 0.68
ASIC1P78348 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ASIC1P78348 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ASIC1P78348 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
ASIC1P78348 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ASIC1P78348 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ASIC1P78348 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
ASIC1P78348 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ASIC1P78348 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ASIC1P78348 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
ASIC1P78348 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms