Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RPS3AP61247 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RPS3AP61247 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPS3AP61247 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS3AP61247 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS3AP61247 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS3AP61247 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS3AP61247 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS3AP61247 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS3AP61247 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS3AP61247 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
RPS3AP61247 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.31■□□□□ 0.2
RPS3AP61247 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RPS3AP61247 LINC02199-201ENST00000506655 2702 ntBASIC16.31■□□□□ 0.2
RPS3AP61247 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
RPS3AP61247 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS3AP61247 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPS3AP61247 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RPS3AP61247 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS3AP61247 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
RPS3AP61247 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.31■□□□□ 0.2
RPS3AP61247 HCG4P8-203ENST00000443049 980 ntBASIC16.31■□□□□ 0.2
RPS3AP61247 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS3AP61247 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPS3AP61247 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RPS3AP61247 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.31■□□□□ 0.2
RPS3AP61247 AC099343.3-201ENST00000605834 2503 ntBASIC16.31■□□□□ 0.2
RPS3AP61247 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPS3AP61247 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS3AP61247 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS3AP61247 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS3AP61247 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.31■□□□□ 0.2
RPS3AP61247 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS3AP61247 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS3AP61247 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.31■□□□□ 0.2
RPS3AP61247 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RPS3AP61247 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPS3AP61247 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS3AP61247 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPS3AP61247 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RPS3AP61247 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS3AP61247 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.3■□□□□ 0.2
RPS3AP61247 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
RPS3AP61247 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPS3AP61247 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.3■□□□□ 0.2
RPS3AP61247 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.3■□□□□ 0.2
RPS3AP61247 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS3AP61247 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.3■□□□□ 0.2
RPS3AP61247 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RPS3AP61247 KRT18P1-202ENST00000452408 1331 ntBASIC16.3■□□□□ 0.2
RPS3AP61247 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS3AP61247 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS3AP61247 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS3AP61247 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.3■□□□□ 0.2
RPS3AP61247 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.3■□□□□ 0.2
RPS3AP61247 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.3■□□□□ 0.2
RPS3AP61247 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
RPS3AP61247 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.3■□□□□ 0.2
RPS3AP61247 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPS3AP61247 AC004263.2-201ENST00000617183 678 ntBASIC16.3■□□□□ 0.2
RPS3AP61247 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS3AP61247 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS3AP61247 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RPS3AP61247 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.3■□□□□ 0.2
RPS3AP61247 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.3■□□□□ 0.2
RPS3AP61247 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS3AP61247 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.3■□□□□ 0.2
RPS3AP61247 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS3AP61247 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS3AP61247 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS3AP61247 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RPS3AP61247 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS3AP61247 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPS3AP61247 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS3AP61247 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPS3AP61247 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.3■□□□□ 0.2
RPS3AP61247 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RPS3AP61247 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS3AP61247 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RPS3AP61247 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS3AP61247 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPS3AP61247 PCDHB17P-201ENST00000539533 2393 ntBASIC16.29■□□□□ 0.2
RPS3AP61247 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS3AP61247 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPS3AP61247 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RPS3AP61247 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS3AP61247 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.29■□□□□ 0.2
RPS3AP61247 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS3AP61247 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.29■□□□□ 0.2
RPS3AP61247 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS3AP61247 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RPS3AP61247 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RPS3AP61247 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS3AP61247 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS3AP61247 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS3AP61247 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS3AP61247 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPS3AP61247 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPS3AP61247 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.29■□□□□ 0.2
RPS3AP61247 TSPY12P-201ENST00000421279 868 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms