Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 STK19B-204ENST00000512515 211 ntBASIC16.16■□□□□ 0.18
PSMD4P55036 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.16■□□□□ 0.18
PSMD4P55036 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.16■□□□□ 0.18
PSMD4P55036 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.16■□□□□ 0.18
PSMD4P55036 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 KRT8P10-201ENST00000450021 1447 ntBASIC16.16■□□□□ 0.18
PSMD4P55036 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.16■□□□□ 0.18
PSMD4P55036 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.16■□□□□ 0.18
PSMD4P55036 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.16■□□□□ 0.18
PSMD4P55036 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PSMD4P55036 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PSMD4P55036 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.15■□□□□ 0.18
PSMD4P55036 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PSMD4P55036 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PSMD4P55036 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PSMD4P55036 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PSMD4P55036 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PSMD4P55036 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PSMD4P55036 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PSMD4P55036 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PSMD4P55036 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PSMD4P55036 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PSMD4P55036 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PSMD4P55036 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.15■□□□□ 0.18
PSMD4P55036 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PSMD4P55036 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PSMD4P55036 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PSMD4P55036 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PSMD4P55036 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PSMD4P55036 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PSMD4P55036 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PSMD4P55036 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PSMD4P55036 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PSMD4P55036 KLF4P1-201ENST00000412782 1185 ntBASIC16.15■□□□□ 0.18
PSMD4P55036 CROCCP2-202ENST00000412962 2773 ntBASIC16.15■□□□□ 0.18
PSMD4P55036 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.15■□□□□ 0.18
PSMD4P55036 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PSMD4P55036 PRORSD1P-202ENST00000563365 2154 ntBASIC16.15■□□□□ 0.18
PSMD4P55036 STK25P1-201ENST00000585406 838 ntBASIC16.15■□□□□ 0.18
PSMD4P55036 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.15■□□□□ 0.18
PSMD4P55036 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.15■□□□□ 0.18
PSMD4P55036 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.15■□□□□ 0.18
PSMD4P55036 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PSMD4P55036 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PSMD4P55036 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PSMD4P55036 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PSMD4P55036 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PSMD4P55036 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PSMD4P55036 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PSMD4P55036 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PSMD4P55036 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.15■□□□□ 0.18
PSMD4P55036 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PSMD4P55036 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PSMD4P55036 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
PSMD4P55036 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
PSMD4P55036 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PSMD4P55036 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PSMD4P55036 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PSMD4P55036 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PSMD4P55036 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PSMD4P55036 AC139713.2-201ENST00000641328 2723 ntBASIC16.14■□□□□ 0.17
PSMD4P55036 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PSMD4P55036 AL645608.8-201ENST00000606034 2086 ntBASIC16.14■□□□□ 0.17
PSMD4P55036 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PSMD4P55036 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.14■□□□□ 0.17
PSMD4P55036 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PSMD4P55036 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.14■□□□□ 0.17
PSMD4P55036 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PSMD4P55036 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.14■□□□□ 0.17
PSMD4P55036 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PSMD4P55036 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PSMD4P55036 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.14■□□□□ 0.17
PSMD4P55036 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.14■□□□□ 0.17
PSMD4P55036 ABCD1P5-201ENST00000445663 754 ntBASIC16.14■□□□□ 0.17
PSMD4P55036 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.14■□□□□ 0.17
PSMD4P55036 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.14■□□□□ 0.17
PSMD4P55036 AC091304.2-201ENST00000564639 760 ntBASIC16.14■□□□□ 0.17
PSMD4P55036 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.14■□□□□ 0.17
PSMD4P55036 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.14■□□□□ 0.17
PSMD4P55036 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.14■□□□□ 0.17
PSMD4P55036 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.14■□□□□ 0.17
PSMD4P55036 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PSMD4P55036 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PSMD4P55036 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.14■□□□□ 0.17
PSMD4P55036 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PSMD4P55036 AC073592.5-201ENST00000624854 528 ntBASIC16.14■□□□□ 0.17
PSMD4P55036 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PSMD4P55036 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms