Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RAD23BP54727 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAD23BP54727 AC004870.1-201ENST00000315132 882 ntBASIC18.52■□□□□ 0.56
RAD23BP54727 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAD23BP54727 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAD23BP54727 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RAD23BP54727 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.52■□□□□ 0.56
RAD23BP54727 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.52■□□□□ 0.56
RAD23BP54727 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RAD23BP54727 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.52■□□□□ 0.56
RAD23BP54727 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.52■□□□□ 0.56
RAD23BP54727 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RAD23BP54727 TP73-AS1-207ENST00000624167 988 ntBASIC18.52■□□□□ 0.56
RAD23BP54727 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.52■□□□□ 0.56
RAD23BP54727 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAD23BP54727 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAD23BP54727 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAD23BP54727 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RAD23BP54727 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
RAD23BP54727 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RAD23BP54727 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.52■□□□□ 0.55
RAD23BP54727 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAD23BP54727 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD23BP54727 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD23BP54727 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAD23BP54727 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.51■□□□□ 0.55
RAD23BP54727 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAD23BP54727 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD23BP54727 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAD23BP54727 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RAD23BP54727 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.51■□□□□ 0.55
RAD23BP54727 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD23BP54727 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD23BP54727 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.51■□□□□ 0.55
RAD23BP54727 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAD23BP54727 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RAD23BP54727 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.51■□□□□ 0.55
RAD23BP54727 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.51■□□□□ 0.55
RAD23BP54727 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.51■□□□□ 0.55
RAD23BP54727 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.51■□□□□ 0.55
RAD23BP54727 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.51■□□□□ 0.55
RAD23BP54727 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.51■□□□□ 0.55
RAD23BP54727 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.51■□□□□ 0.55
RAD23BP54727 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAD23BP54727 AC104692.2-201ENST00000603054 253 ntBASIC18.51■□□□□ 0.55
RAD23BP54727 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.51■□□□□ 0.55
RAD23BP54727 AL031008.1-201ENST00000619963 541 ntBASIC18.51■□□□□ 0.55
RAD23BP54727 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RAD23BP54727 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.51■□□□□ 0.55
RAD23BP54727 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAD23BP54727 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RAD23BP54727 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RAD23BP54727 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD23BP54727 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.51■□□□□ 0.55
RAD23BP54727 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD23BP54727 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD23BP54727 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD23BP54727 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RAD23BP54727 AC084018.2-201ENST00000613093 2607 ntBASIC18.51■□□□□ 0.55
RAD23BP54727 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAD23BP54727 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAD23BP54727 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD23BP54727 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
RAD23BP54727 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.5■□□□□ 0.55
RAD23BP54727 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD23BP54727 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAD23BP54727 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD23BP54727 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD23BP54727 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD23BP54727 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
RAD23BP54727 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.5■□□□□ 0.55
RAD23BP54727 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD23BP54727 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAD23BP54727 SLC25A1P3-201ENST00000395415 828 ntBASIC18.5■□□□□ 0.55
RAD23BP54727 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RAD23BP54727 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.5■□□□□ 0.55
RAD23BP54727 FAAHP1-202ENST00000446499 1238 ntBASIC18.5■□□□□ 0.55
RAD23BP54727 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RAD23BP54727 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.5■□□□□ 0.55
RAD23BP54727 AC021087.4-201ENST00000563761 564 ntBASIC18.5■□□□□ 0.55
RAD23BP54727 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
RAD23BP54727 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.5■□□□□ 0.55
RAD23BP54727 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.5■□□□□ 0.55
RAD23BP54727 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.5■□□□□ 0.55
RAD23BP54727 AL022326.1-202ENST00000641533 845 ntBASIC18.5■□□□□ 0.55
RAD23BP54727 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.5■□□□□ 0.55
RAD23BP54727 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.5■□□□□ 0.55
RAD23BP54727 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RAD23BP54727 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD23BP54727 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD23BP54727 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD23BP54727 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RAD23BP54727 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RAD23BP54727 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.49■□□□□ 0.55
RAD23BP54727 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.49■□□□□ 0.55
RAD23BP54727 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RAD23BP54727 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.49■□□□□ 0.55
RAD23BP54727 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAD23BP54727 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RAD23BP54727 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms