Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.61■□□□□ 0.25
HLCSP50747 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLCSP50747 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLCSP50747 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
HLCSP50747 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.61■□□□□ 0.25
HLCSP50747 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLCSP50747 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HLCSP50747 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLCSP50747 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.61■□□□□ 0.25
HLCSP50747 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLCSP50747 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.61■□□□□ 0.25
HLCSP50747 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.61■□□□□ 0.25
HLCSP50747 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.61■□□□□ 0.25
HLCSP50747 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLCSP50747 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLCSP50747 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.61■□□□□ 0.25
HLCSP50747 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
HLCSP50747 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLCSP50747 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.61■□□□□ 0.25
HLCSP50747 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.61■□□□□ 0.25
HLCSP50747 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.61■□□□□ 0.25
HLCSP50747 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLCSP50747 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLCSP50747 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLCSP50747 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLCSP50747 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.61■□□□□ 0.25
HLCSP50747 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HLCSP50747 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLCSP50747 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.61■□□□□ 0.25
HLCSP50747 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.61■□□□□ 0.25
HLCSP50747 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.6■□□□□ 0.25
HLCSP50747 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.6■□□□□ 0.25
HLCSP50747 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.6■□□□□ 0.25
HLCSP50747 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.6■□□□□ 0.25
HLCSP50747 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.6■□□□□ 0.25
HLCSP50747 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.6■□□□□ 0.25
HLCSP50747 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
HLCSP50747 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.6■□□□□ 0.25
HLCSP50747 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HLCSP50747 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.6■□□□□ 0.25
HLCSP50747 KRT18P65-201ENST00000439811 1286 ntBASIC16.6■□□□□ 0.25
HLCSP50747 FAAHP1-202ENST00000446499 1238 ntBASIC16.6■□□□□ 0.25
HLCSP50747 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.6■□□□□ 0.25
HLCSP50747 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.6■□□□□ 0.25
HLCSP50747 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.6■□□□□ 0.25
HLCSP50747 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HLCSP50747 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
HLCSP50747 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HLCSP50747 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.6■□□□□ 0.25
HLCSP50747 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
HLCSP50747 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.6■□□□□ 0.25
HLCSP50747 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLCSP50747 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLCSP50747 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLCSP50747 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLCSP50747 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLCSP50747 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLCSP50747 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLCSP50747 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLCSP50747 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLCSP50747 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLCSP50747 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.59■□□□□ 0.25
HLCSP50747 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLCSP50747 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLCSP50747 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLCSP50747 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HLCSP50747 POM121L3P-201ENST00000419331 1163 ntBASIC16.59■□□□□ 0.25
HLCSP50747 AC026396.1-201ENST00000419388 421 ntBASIC16.59■□□□□ 0.25
HLCSP50747 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.59■□□□□ 0.25
HLCSP50747 KRT16P4-201ENST00000453883 522 ntBASIC16.59■□□□□ 0.25
HLCSP50747 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.59■□□□□ 0.25
HLCSP50747 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
HLCSP50747 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.59■□□□□ 0.25
HLCSP50747 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.59■□□□□ 0.25
HLCSP50747 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.59■□□□□ 0.25
HLCSP50747 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.59■□□□□ 0.25
HLCSP50747 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms