Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 AC022188.1-201ENST00000620960 1664 ntBASIC13.74□□□□□ -0.21
CDC34P49427 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CDC34P49427 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CDC34P49427 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CDC34P49427 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.74□□□□□ -0.21
CDC34P49427 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CDC34P49427 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
CDC34P49427 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.73□□□□□ -0.21
CDC34P49427 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDC34P49427 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.73□□□□□ -0.21
CDC34P49427 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC34P49427 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC34P49427 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC34P49427 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC34P49427 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CDC34P49427 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.73□□□□□ -0.21
CDC34P49427 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.73□□□□□ -0.21
CDC34P49427 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
CDC34P49427 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CDC34P49427 HYMAI-201ENST00000635591 3347 ntBASIC13.73□□□□□ -0.21
CDC34P49427 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CDC34P49427 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC34P49427 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CDC34P49427 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CDC34P49427 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
CDC34P49427 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CDC34P49427 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC34P49427 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC34P49427 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.73□□□□□ -0.21
CDC34P49427 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CDC34P49427 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.73□□□□□ -0.21
CDC34P49427 AC005104.2-201ENST00000427818 678 ntBASIC13.73□□□□□ -0.21
CDC34P49427 FDX2-206ENST00000492239 773 ntTSL 2 BASIC13.73□□□□□ -0.21
CDC34P49427 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CDC34P49427 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC13.73□□□□□ -0.21
CDC34P49427 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.73□□□□□ -0.21
CDC34P49427 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CDC34P49427 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CDC34P49427 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.73□□□□□ -0.21
CDC34P49427 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CDC34P49427 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC34P49427 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC34P49427 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.73□□□□□ -0.21
CDC34P49427 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.73□□□□□ -0.21
CDC34P49427 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC34P49427 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.73□□□□□ -0.21
CDC34P49427 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC34P49427 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.73□□□□□ -0.21
CDC34P49427 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.73□□□□□ -0.21
CDC34P49427 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC34P49427 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC34P49427 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC34P49427 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CDC34P49427 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CDC34P49427 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CDC34P49427 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC34P49427 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.72□□□□□ -0.21
CDC34P49427 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.72□□□□□ -0.21
CDC34P49427 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC34P49427 KRT8P47-201ENST00000604727 1398 ntBASIC13.72□□□□□ -0.21
CDC34P49427 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC34P49427 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.72□□□□□ -0.21
CDC34P49427 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC34P49427 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC34P49427 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC34P49427 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC34P49427 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC34P49427 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC34P49427 KRT18P29-201ENST00000397031 1267 ntBASIC13.72□□□□□ -0.21
CDC34P49427 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.72□□□□□ -0.21
CDC34P49427 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.72□□□□□ -0.21
CDC34P49427 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC13.72□□□□□ -0.21
CDC34P49427 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.72□□□□□ -0.21
CDC34P49427 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
CDC34P49427 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC13.72□□□□□ -0.21
CDC34P49427 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.72□□□□□ -0.21
CDC34P49427 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC13.72□□□□□ -0.21
CDC34P49427 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
CDC34P49427 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC34P49427 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC34P49427 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
CDC34P49427 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
CDC34P49427 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CDC34P49427 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CDC34P49427 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CDC34P49427 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms