Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF4P48230 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.52■□□□□ 0.72
TM4SF4P48230 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.52■□□□□ 0.72
TM4SF4P48230 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF4P48230 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF4P48230 MIR658-201ENST00000385210 100 ntBASIC19.52■□□□□ 0.72
TM4SF4P48230 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC19.52■□□□□ 0.72
TM4SF4P48230 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF4P48230 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.52■□□□□ 0.72
TM4SF4P48230 KRT17P8-201ENST00000540749 863 ntBASIC19.52■□□□□ 0.72
TM4SF4P48230 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TM4SF4P48230 RNA5-8SN1-201ENST00000610460 153 ntBASIC19.52■□□□□ 0.72
TM4SF4P48230 RNA5-8SN5-202ENST00000612463 153 ntBASIC19.52■□□□□ 0.72
TM4SF4P48230 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.52■□□□□ 0.72
TM4SF4P48230 RNA5-8SN4-201ENST00000613359 153 ntBASIC19.52■□□□□ 0.72
TM4SF4P48230 TEX28P1-201ENST00000613479 1221 ntBASIC19.52■□□□□ 0.72
TM4SF4P48230 TEX28P2-201ENST00000617764 1221 ntBASIC19.52■□□□□ 0.72
TM4SF4P48230 RNA5-8SN5-201ENST00000619471 153 ntBASIC19.52■□□□□ 0.72
TM4SF4P48230 AC004840.1-201ENST00000636359 365 ntBASIC19.52■□□□□ 0.72
TM4SF4P48230 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF4P48230 AL035456.1-201ENST00000456064 1369 ntBASIC19.52■□□□□ 0.72
TM4SF4P48230 AL391825.1-201ENST00000457671 1364 ntBASIC19.52■□□□□ 0.72
TM4SF4P48230 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.52■□□□□ 0.72
TM4SF4P48230 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TM4SF4P48230 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TM4SF4P48230 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.52■□□□□ 0.71
TM4SF4P48230 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TM4SF4P48230 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.52■□□□□ 0.71
TM4SF4P48230 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
TM4SF4P48230 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TM4SF4P48230 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM4SF4P48230 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TM4SF4P48230 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM4SF4P48230 DFFBP1-201ENST00000433250 979 ntBASIC19.51■□□□□ 0.71
TM4SF4P48230 AC011495.1-201ENST00000498085 584 ntBASIC19.51■□□□□ 0.71
TM4SF4P48230 AC105233.2-201ENST00000523697 349 ntBASIC19.51■□□□□ 0.71
TM4SF4P48230 AF228730.5-201ENST00000530288 346 ntBASIC19.51■□□□□ 0.71
TM4SF4P48230 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.51■□□□□ 0.71
TM4SF4P48230 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC19.51■□□□□ 0.71
TM4SF4P48230 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TM4SF4P48230 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TM4SF4P48230 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TM4SF4P48230 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.51■□□□□ 0.71
TM4SF4P48230 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.51■□□□□ 0.71
TM4SF4P48230 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM4SF4P48230 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM4SF4P48230 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TM4SF4P48230 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM4SF4P48230 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TM4SF4P48230 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.51■□□□□ 0.71
TM4SF4P48230 REXO1L11P-201ENST00000620964 1927 ntBASIC19.51■□□□□ 0.71
TM4SF4P48230 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TM4SF4P48230 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TM4SF4P48230 KRT18P55-202ENST00000578578 1546 ntBASIC19.51■□□□□ 0.71
TM4SF4P48230 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TM4SF4P48230 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TM4SF4P48230 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.51■□□□□ 0.71
TM4SF4P48230 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.51■□□□□ 0.71
TM4SF4P48230 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TM4SF4P48230 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.5■□□□□ 0.71
TM4SF4P48230 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM4SF4P48230 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM4SF4P48230 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TM4SF4P48230 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.5■□□□□ 0.71
TM4SF4P48230 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.5■□□□□ 0.71
TM4SF4P48230 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TM4SF4P48230 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TM4SF4P48230 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC19.5■□□□□ 0.71
TM4SF4P48230 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.5■□□□□ 0.71
TM4SF4P48230 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.5■□□□□ 0.71
TM4SF4P48230 AC022210.1-201ENST00000449856 793 ntBASIC19.5■□□□□ 0.71
TM4SF4P48230 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TM4SF4P48230 AC092658.1-201ENST00000505836 891 ntBASIC19.5■□□□□ 0.71
TM4SF4P48230 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.5■□□□□ 0.71
TM4SF4P48230 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.5■□□□□ 0.71
TM4SF4P48230 RAB43P1-201ENST00000561790 589 ntBASIC19.5■□□□□ 0.71
TM4SF4P48230 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
TM4SF4P48230 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TM4SF4P48230 AC073389.1-201ENST00000595595 795 ntBASIC19.5■□□□□ 0.71
TM4SF4P48230 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.5■□□□□ 0.71
TM4SF4P48230 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.5■□□□□ 0.71
TM4SF4P48230 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.5■□□□□ 0.71
TM4SF4P48230 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF4P48230 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF4P48230 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF4P48230 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF4P48230 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.49■□□□□ 0.71
TM4SF4P48230 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF4P48230 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF4P48230 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF4P48230 AP000997.3-201ENST00000623333 2250 ntBASIC19.49■□□□□ 0.71
TM4SF4P48230 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TM4SF4P48230 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TM4SF4P48230 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF4P48230 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF4P48230 AC087499.6-201ENST00000411576 835 ntBASIC19.49■□□□□ 0.71
TM4SF4P48230 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.49■□□□□ 0.71
TM4SF4P48230 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC19.49■□□□□ 0.71
TM4SF4P48230 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF4P48230 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms