Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GRIK1P39086 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GRIK1P39086 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.26■□□□□ 0.51
GRIK1P39086 PTCHD3P3-201ENST00000403073 906 ntBASIC18.26■□□□□ 0.51
GRIK1P39086 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.26■□□□□ 0.51
GRIK1P39086 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
GRIK1P39086 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.26■□□□□ 0.51
GRIK1P39086 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GRIK1P39086 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GRIK1P39086 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.26■□□□□ 0.51
GRIK1P39086 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GRIK1P39086 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GRIK1P39086 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.26■□□□□ 0.51
GRIK1P39086 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.26■□□□□ 0.51
GRIK1P39086 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GRIK1P39086 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.25■□□□□ 0.51
GRIK1P39086 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GRIK1P39086 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.25■□□□□ 0.51
GRIK1P39086 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.25■□□□□ 0.51
GRIK1P39086 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GRIK1P39086 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GRIK1P39086 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GRIK1P39086 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GRIK1P39086 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.25■□□□□ 0.51
GRIK1P39086 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
GRIK1P39086 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GRIK1P39086 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
GRIK1P39086 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GRIK1P39086 GNAS-203ENST00000306120 1878 ntBASIC18.25■□□□□ 0.51
GRIK1P39086 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
GRIK1P39086 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GRIK1P39086 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
GRIK1P39086 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GRIK1P39086 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GRIK1P39086 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.25■□□□□ 0.51
GRIK1P39086 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.25■□□□□ 0.51
GRIK1P39086 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
GRIK1P39086 AC007967.2-201ENST00000432613 625 ntBASIC18.25■□□□□ 0.51
GRIK1P39086 AL591424.1-201ENST00000442569 1213 ntBASIC18.25■□□□□ 0.51
GRIK1P39086 AC008667.4-201ENST00000607370 168 ntBASIC18.25■□□□□ 0.51
GRIK1P39086 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
GRIK1P39086 FAM197Y3-203ENST00000618346 717 ntBASIC18.25■□□□□ 0.51
GRIK1P39086 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GRIK1P39086 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GRIK1P39086 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
GRIK1P39086 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GRIK1P39086 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
GRIK1P39086 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
GRIK1P39086 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.25■□□□□ 0.51
GRIK1P39086 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
GRIK1P39086 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
GRIK1P39086 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
GRIK1P39086 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GRIK1P39086 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
GRIK1P39086 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GRIK1P39086 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GRIK1P39086 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GRIK1P39086 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.24■□□□□ 0.51
GRIK1P39086 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.24■□□□□ 0.51
GRIK1P39086 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.24■□□□□ 0.51
GRIK1P39086 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.24■□□□□ 0.51
GRIK1P39086 KRT18P3-201ENST00000451602 1288 ntBASIC18.24■□□□□ 0.51
GRIK1P39086 IGHV3-65-201ENST00000523210 341 ntBASIC18.24■□□□□ 0.51
GRIK1P39086 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GRIK1P39086 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.24■□□□□ 0.51
GRIK1P39086 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.24■□□□□ 0.51
GRIK1P39086 AL805961.1-202ENST00000641562 540 ntBASIC18.24■□□□□ 0.51
GRIK1P39086 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GRIK1P39086 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GRIK1P39086 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
GRIK1P39086 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
GRIK1P39086 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GRIK1P39086 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.24■□□□□ 0.51
GRIK1P39086 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.24■□□□□ 0.51
GRIK1P39086 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.24■□□□□ 0.51
GRIK1P39086 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GRIK1P39086 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.24■□□□□ 0.51
GRIK1P39086 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GRIK1P39086 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
GRIK1P39086 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GRIK1P39086 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GRIK1P39086 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
GRIK1P39086 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.23■□□□□ 0.51
GRIK1P39086 AL590787.1-201ENST00000568856 1315 ntBASIC18.23■□□□□ 0.51
GRIK1P39086 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.23■□□□□ 0.51
GRIK1P39086 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.23■□□□□ 0.51
GRIK1P39086 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
GRIK1P39086 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GRIK1P39086 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
GRIK1P39086 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
GRIK1P39086 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
GRIK1P39086 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GRIK1P39086 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GRIK1P39086 AC108073.2-201ENST00000464002 357 ntBASIC18.23■□□□□ 0.51
GRIK1P39086 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.23■□□□□ 0.51
GRIK1P39086 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.23■□□□□ 0.51
GRIK1P39086 MIR4751-201ENST00000578027 74 ntBASIC18.23■□□□□ 0.51
GRIK1P39086 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.23■□□□□ 0.51
GRIK1P39086 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.23■□□□□ 0.51
GRIK1P39086 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms