Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COPB2P35606 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
COPB2P35606 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPB2P35606 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPB2P35606 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPB2P35606 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
COPB2P35606 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPB2P35606 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
COPB2P35606 AL645939.2-201ENST00000427340 991 ntBASIC19.74■□□□□ 0.75
COPB2P35606 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.74■□□□□ 0.75
COPB2P35606 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COPB2P35606 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.74■□□□□ 0.75
COPB2P35606 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.74■□□□□ 0.75
COPB2P35606 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
COPB2P35606 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.74■□□□□ 0.75
COPB2P35606 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.74■□□□□ 0.75
COPB2P35606 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.74■□□□□ 0.75
COPB2P35606 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.74■□□□□ 0.75
COPB2P35606 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
COPB2P35606 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COPB2P35606 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.74■□□□□ 0.75
COPB2P35606 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
COPB2P35606 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COPB2P35606 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.74■□□□□ 0.75
COPB2P35606 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COPB2P35606 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
COPB2P35606 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPB2P35606 NOC2LP1-202ENST00000452600 2235 ntBASIC19.74■□□□□ 0.75
COPB2P35606 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPB2P35606 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPB2P35606 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPB2P35606 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPB2P35606 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.73■□□□□ 0.75
COPB2P35606 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
COPB2P35606 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
COPB2P35606 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.73■□□□□ 0.75
COPB2P35606 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
COPB2P35606 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPB2P35606 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPB2P35606 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPB2P35606 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.73■□□□□ 0.75
COPB2P35606 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COPB2P35606 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.73■□□□□ 0.75
COPB2P35606 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.73■□□□□ 0.75
COPB2P35606 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COPB2P35606 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COPB2P35606 CYMP-203ENST00000474680 1263 ntBASIC19.73■□□□□ 0.75
COPB2P35606 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COPB2P35606 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.73■□□□□ 0.75
COPB2P35606 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
COPB2P35606 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
COPB2P35606 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.73■□□□□ 0.75
COPB2P35606 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPB2P35606 REXO1L3P-201ENST00000622202 1288 ntBASIC19.73■□□□□ 0.75
COPB2P35606 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPB2P35606 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.73■□□□□ 0.75
COPB2P35606 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPB2P35606 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPB2P35606 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPB2P35606 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.73■□□□□ 0.75
COPB2P35606 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPB2P35606 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COPB2P35606 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPB2P35606 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COPB2P35606 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
COPB2P35606 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.73■□□□□ 0.75
COPB2P35606 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
COPB2P35606 REXO1L11P-201ENST00000620964 1927 ntBASIC19.72■□□□□ 0.75
COPB2P35606 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPB2P35606 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COPB2P35606 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPB2P35606 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
COPB2P35606 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COPB2P35606 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COPB2P35606 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COPB2P35606 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COPB2P35606 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COPB2P35606 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
COPB2P35606 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.72■□□□□ 0.75
COPB2P35606 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COPB2P35606 AC112191.1-201ENST00000523689 701 ntBASIC19.72■□□□□ 0.75
COPB2P35606 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.72■□□□□ 0.75
COPB2P35606 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.72■□□□□ 0.75
COPB2P35606 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.72■□□□□ 0.75
COPB2P35606 AC004835.2-201ENST00000603762 682 ntBASIC19.72■□□□□ 0.75
COPB2P35606 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.72■□□□□ 0.75
COPB2P35606 ACTL9-202ENST00000612068 1252 ntBASIC19.72■□□□□ 0.75
COPB2P35606 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.72■□□□□ 0.75
COPB2P35606 AL513210.1-201ENST00000629608 234 ntBASIC19.72■□□□□ 0.75
COPB2P35606 AC092902.6-201ENST00000641783 218 ntBASIC19.72■□□□□ 0.75
COPB2P35606 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPB2P35606 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPB2P35606 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
COPB2P35606 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.72■□□□□ 0.75
COPB2P35606 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
COPB2P35606 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
COPB2P35606 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
COPB2P35606 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
COPB2P35606 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
COPB2P35606 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms