Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CKS2P33552 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.8□□□□□ -0.36
CKS2P33552 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
CKS2P33552 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CKS2P33552 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
CKS2P33552 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
CKS2P33552 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
CKS2P33552 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC12.8□□□□□ -0.36
CKS2P33552 AC092068.3-201ENST00000587894 2016 ntBASIC12.8□□□□□ -0.36
CKS2P33552 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.8□□□□□ -0.36
CKS2P33552 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC12.8□□□□□ -0.36
CKS2P33552 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.8□□□□□ -0.36
CKS2P33552 AC011506.1-201ENST00000474329 610 ntBASIC12.8□□□□□ -0.36
CKS2P33552 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 LY6E-205ENST00000519611 635 ntTSL 3 BASIC12.8□□□□□ -0.36
CKS2P33552 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
CKS2P33552 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
CKS2P33552 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC12.8□□□□□ -0.36
CKS2P33552 AC098934.4-201ENST00000564127 592 ntBASIC12.8□□□□□ -0.36
CKS2P33552 MIR3180-4-201ENST00000582223 153 ntBASIC12.8□□□□□ -0.36
CKS2P33552 AC133041.1-202ENST00000642053 222 ntBASIC12.8□□□□□ -0.36
CKS2P33552 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CKS2P33552 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC12.8□□□□□ -0.36
CKS2P33552 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC12.8□□□□□ -0.36
CKS2P33552 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC12.8□□□□□ -0.36
CKS2P33552 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.8□□□□□ -0.36
CKS2P33552 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CKS2P33552 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.8□□□□□ -0.36
CKS2P33552 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CKS2P33552 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CKS2P33552 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CKS2P33552 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CKS2P33552 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CKS2P33552 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CKS2P33552 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CKS2P33552 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC12.79□□□□□ -0.36
CKS2P33552 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CKS2P33552 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CKS2P33552 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.79□□□□□ -0.36
CKS2P33552 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CKS2P33552 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CKS2P33552 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.79□□□□□ -0.36
CKS2P33552 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC12.79□□□□□ -0.36
CKS2P33552 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CKS2P33552 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CKS2P33552 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CKS2P33552 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CKS2P33552 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CKS2P33552 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CKS2P33552 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC12.79□□□□□ -0.36
CKS2P33552 AL353807.1-201ENST00000427475 662 ntBASIC12.79□□□□□ -0.36
CKS2P33552 B3GAT3P1-201ENST00000471720 806 ntBASIC12.79□□□□□ -0.36
CKS2P33552 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC12.79□□□□□ -0.36
CKS2P33552 AC008403.3-201ENST00000598924 454 ntBASIC12.79□□□□□ -0.36
CKS2P33552 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CKS2P33552 AP000692.2-201ENST00000608391 879 ntBASIC12.79□□□□□ -0.36
CKS2P33552 AC110285.5-201ENST00000611501 352 ntBASIC12.79□□□□□ -0.36
CKS2P33552 CABP2-204ENST00000636477 941 ntTSL 5 BASIC12.79□□□□□ -0.36
CKS2P33552 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CKS2P33552 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CKS2P33552 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CKS2P33552 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CKS2P33552 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC12.79□□□□□ -0.36
CKS2P33552 AC103702.1-201ENST00000548801 2630 ntBASIC12.79□□□□□ -0.36
CKS2P33552 SBF1P1-201ENST00000444527 5631 ntBASIC12.79□□□□□ -0.36
CKS2P33552 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CKS2P33552 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC12.79□□□□□ -0.36
CKS2P33552 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CKS2P33552 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CKS2P33552 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.79□□□□□ -0.36
CKS2P33552 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CKS2P33552 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CKS2P33552 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CKS2P33552 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CKS2P33552 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CKS2P33552 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CKS2P33552 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
CKS2P33552 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms