Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA11P31270 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HOXA11P31270 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HOXA11P31270 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA11P31270 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HOXA11P31270 AC093525.9-201ENST00000624961 1746 ntBASIC18.61■□□□□ 0.57
HOXA11P31270 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA11P31270 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.61■□□□□ 0.57
HOXA11P31270 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA11P31270 AC092919.2-201ENST00000623631 1645 ntBASIC18.61■□□□□ 0.57
HOXA11P31270 EGFEM1P-202ENST00000431685 1563 ntBASIC18.61■□□□□ 0.57
HOXA11P31270 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA11P31270 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA11P31270 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.61■□□□□ 0.57
HOXA11P31270 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.61■□□□□ 0.57
HOXA11P31270 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA11P31270 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA11P31270 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HOXA11P31270 AP002472.1-201ENST00000577490 586 ntBASIC18.61■□□□□ 0.57
HOXA11P31270 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.61■□□□□ 0.57
HOXA11P31270 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.61■□□□□ 0.57
HOXA11P31270 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.61■□□□□ 0.57
HOXA11P31270 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA11P31270 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.61■□□□□ 0.57
HOXA11P31270 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.61■□□□□ 0.57
HOXA11P31270 AC079781.4-201ENST00000641908 219 ntBASIC18.61■□□□□ 0.57
HOXA11P31270 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA11P31270 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.61■□□□□ 0.57
HOXA11P31270 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HOXA11P31270 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA11P31270 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA11P31270 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
HOXA11P31270 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA11P31270 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA11P31270 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
HOXA11P31270 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXA11P31270 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HOXA11P31270 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA11P31270 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA11P31270 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.6■□□□□ 0.57
HOXA11P31270 AC116353.5-201ENST00000638148 1699 ntBASIC18.6■□□□□ 0.57
HOXA11P31270 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
HOXA11P31270 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA11P31270 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA11P31270 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA11P31270 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA11P31270 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.6■□□□□ 0.57
HOXA11P31270 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.6■□□□□ 0.57
HOXA11P31270 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
HOXA11P31270 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.6■□□□□ 0.57
HOXA11P31270 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA11P31270 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.6■□□□□ 0.57
HOXA11P31270 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA11P31270 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.6■□□□□ 0.57
HOXA11P31270 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.6■□□□□ 0.57
HOXA11P31270 AC091812.2-201ENST00000619081 385 ntBASIC18.6■□□□□ 0.57
HOXA11P31270 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA11P31270 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA11P31270 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA11P31270 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA11P31270 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA11P31270 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.6■□□□□ 0.57
HOXA11P31270 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA11P31270 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA11P31270 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA11P31270 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA11P31270 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.6■□□□□ 0.57
HOXA11P31270 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.6■□□□□ 0.57
HOXA11P31270 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXA11P31270 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.6■□□□□ 0.57
HOXA11P31270 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HOXA11P31270 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA11P31270 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA11P31270 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA11P31270 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA11P31270 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA11P31270 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.59■□□□□ 0.57
HOXA11P31270 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA11P31270 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA11P31270 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
HOXA11P31270 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA11P31270 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA11P31270 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA11P31270 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA11P31270 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA11P31270 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA11P31270 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA11P31270 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA11P31270 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA11P31270 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.59■□□□□ 0.57
HOXA11P31270 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.59■□□□□ 0.57
HOXA11P31270 FAM58CP-201ENST00000435741 640 ntBASIC18.59■□□□□ 0.57
HOXA11P31270 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.59■□□□□ 0.57
HOXA11P31270 CEND1P1-201ENST00000451006 455 ntBASIC18.59■□□□□ 0.57
HOXA11P31270 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
HOXA11P31270 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HOXA11P31270 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.59■□□□□ 0.57
HOXA11P31270 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HOXA11P31270 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HOXA11P31270 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms