Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC22.38■■□□□ 1.17
RXRBP28702 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC22.38■■□□□ 1.17
RXRBP28702 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC22.38■■□□□ 1.17
RXRBP28702 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC22.38■■□□□ 1.17
RXRBP28702 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC22.38■■□□□ 1.17
RXRBP28702 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC22.38■■□□□ 1.17
RXRBP28702 BTNL10-201ENST00000595971 695 ntBASIC22.38■■□□□ 1.17
RXRBP28702 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC22.38■■□□□ 1.17
RXRBP28702 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC22.38■■□□□ 1.17
RXRBP28702 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RXRBP28702 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC22.38■■□□□ 1.17
RXRBP28702 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.38■■□□□ 1.17
RXRBP28702 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RXRBP28702 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RXRBP28702 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC22.38■■□□□ 1.17
RXRBP28702 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RXRBP28702 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
RXRBP28702 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RXRBP28702 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RXRBP28702 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
RXRBP28702 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
RXRBP28702 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RXRBP28702 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
RXRBP28702 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RXRBP28702 ENSA-206ENST00000361631 725 ntTSL 2 BASIC22.37■■□□□ 1.17
RXRBP28702 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC22.37■■□□□ 1.17
RXRBP28702 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC22.37■■□□□ 1.17
RXRBP28702 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC22.37■■□□□ 1.17
RXRBP28702 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC22.37■■□□□ 1.17
RXRBP28702 PFN1P12-201ENST00000455938 534 ntBASIC22.37■■□□□ 1.17
RXRBP28702 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC22.37■■□□□ 1.17
RXRBP28702 SPDYE18-201ENST00000510091 1050 ntBASIC22.37■■□□□ 1.17
RXRBP28702 RNA5SP412-201ENST00000516234 123 ntBASIC22.37■■□□□ 1.17
RXRBP28702 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC22.37■■□□□ 1.17
RXRBP28702 EMC4-209ENST00000559421 497 ntTSL 2 BASIC22.37■■□□□ 1.17
RXRBP28702 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC22.37■■□□□ 1.17
RXRBP28702 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC22.37■■□□□ 1.17
RXRBP28702 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC22.37■■□□□ 1.17
RXRBP28702 AL031055.1-201ENST00000606362 631 ntBASIC22.37■■□□□ 1.17
RXRBP28702 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RXRBP28702 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
RXRBP28702 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC22.37■■□□□ 1.17
RXRBP28702 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
RXRBP28702 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
RXRBP28702 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
RXRBP28702 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.37■■□□□ 1.17
RXRBP28702 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.37■■□□□ 1.17
RXRBP28702 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.37■■□□□ 1.17
RXRBP28702 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RXRBP28702 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RXRBP28702 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RXRBP28702 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
RXRBP28702 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC22.36■■□□□ 1.17
RXRBP28702 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RXRBP28702 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RXRBP28702 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RXRBP28702 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RXRBP28702 RNU1-129P-201ENST00000384064 167 ntBASIC22.36■■□□□ 1.17
RXRBP28702 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC22.36■■□□□ 1.17
RXRBP28702 CTBP2P5-201ENST00000454986 1264 ntBASIC22.36■■□□□ 1.17
RXRBP28702 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC22.36■■□□□ 1.17
RXRBP28702 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
RXRBP28702 AC123567.1-201ENST00000548294 1261 ntBASIC22.36■■□□□ 1.17
RXRBP28702 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
RXRBP28702 U1.21-201ENST00000580816 167 ntBASIC22.36■■□□□ 1.17
RXRBP28702 NAT9-224ENST00000583757 583 ntTSL 3 BASIC22.36■■□□□ 1.17
RXRBP28702 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
RXRBP28702 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC22.36■■□□□ 1.17
RXRBP28702 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RXRBP28702 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RXRBP28702 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.36■■□□□ 1.17
RXRBP28702 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
RXRBP28702 SP100-208ENST00000427101 1922 ntTSL 2 BASIC22.35■■□□□ 1.17
RXRBP28702 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
RXRBP28702 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RXRBP28702 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RXRBP28702 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC22.35■■□□□ 1.17
RXRBP28702 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RXRBP28702 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.35■■□□□ 1.17
RXRBP28702 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RXRBP28702 NSL1-201ENST00000366976 722 ntTSL 2 BASIC22.35■■□□□ 1.17
RXRBP28702 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RXRBP28702 PP14571-201ENST00000404327 934 ntTSL 2 BASIC22.35■■□□□ 1.17
RXRBP28702 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
RXRBP28702 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC22.35■■□□□ 1.17
RXRBP28702 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC22.35■■□□□ 1.17
RXRBP28702 MTRF1LP2-201ENST00000506027 1122 ntBASIC22.35■■□□□ 1.17
RXRBP28702 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC22.35■■□□□ 1.17
RXRBP28702 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RXRBP28702 AC243960.2-201ENST00000600996 747 ntBASIC22.35■■□□□ 1.17
RXRBP28702 AC009949.1-201ENST00000623048 1830 ntBASIC22.35■■□□□ 1.17
RXRBP28702 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC22.35■■□□□ 1.17
RXRBP28702 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
RXRBP28702 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC22.35■■□□□ 1.17
RXRBP28702 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
RXRBP28702 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
RXRBP28702 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC22.35■■□□□ 1.17
RXRBP28702 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
RXRBP28702 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC22.34■■□□□ 1.17
RXRBP28702 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms