Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ABCD3P28288 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.97■□□□□ 0.15
ABCD3P28288 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
ABCD3P28288 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
ABCD3P28288 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.96■□□□□ 0.15
ABCD3P28288 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ABCD3P28288 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
ABCD3P28288 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
ABCD3P28288 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
ABCD3P28288 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ABCD3P28288 AC141586.5-201ENST00000624546 2050 ntBASIC15.96■□□□□ 0.15
ABCD3P28288 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ABCD3P28288 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ABCD3P28288 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.96■□□□□ 0.15
ABCD3P28288 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ABCD3P28288 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ABCD3P28288 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
ABCD3P28288 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ABCD3P28288 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ABCD3P28288 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ABCD3P28288 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ABCD3P28288 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.96■□□□□ 0.15
ABCD3P28288 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.96■□□□□ 0.15
ABCD3P28288 AL031284.1-201ENST00000419297 478 ntBASIC15.96■□□□□ 0.15
ABCD3P28288 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.96■□□□□ 0.15
ABCD3P28288 LINC00982-205ENST00000420957 435 ntBASIC15.96■□□□□ 0.15
ABCD3P28288 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.96■□□□□ 0.15
ABCD3P28288 FDX1P1-201ENST00000449115 551 ntBASIC15.96■□□□□ 0.15
ABCD3P28288 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.96■□□□□ 0.15
ABCD3P28288 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.96■□□□□ 0.15
ABCD3P28288 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.96■□□□□ 0.15
ABCD3P28288 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.96■□□□□ 0.15
ABCD3P28288 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.96■□□□□ 0.15
ABCD3P28288 FAM215A-202ENST00000632077 792 ntBASIC15.96■□□□□ 0.15
ABCD3P28288 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.96■□□□□ 0.15
ABCD3P28288 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.96■□□□□ 0.15
ABCD3P28288 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ABCD3P28288 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
ABCD3P28288 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ABCD3P28288 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
ABCD3P28288 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
ABCD3P28288 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
ABCD3P28288 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.96■□□□□ 0.14
ABCD3P28288 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
ABCD3P28288 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.96■□□□□ 0.14
ABCD3P28288 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ABCD3P28288 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
ABCD3P28288 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ABCD3P28288 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.95■□□□□ 0.14
ABCD3P28288 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.95■□□□□ 0.14
ABCD3P28288 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.95■□□□□ 0.14
ABCD3P28288 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ABCD3P28288 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ABCD3P28288 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
ABCD3P28288 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ABCD3P28288 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.95■□□□□ 0.14
ABCD3P28288 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.95■□□□□ 0.14
ABCD3P28288 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ABCD3P28288 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.95■□□□□ 0.14
ABCD3P28288 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.95■□□□□ 0.14
ABCD3P28288 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.95■□□□□ 0.14
ABCD3P28288 AP001005.1-201ENST00000571755 1248 ntBASIC15.95■□□□□ 0.14
ABCD3P28288 AC006557.2-201ENST00000592985 1240 ntBASIC15.95■□□□□ 0.14
ABCD3P28288 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.95■□□□□ 0.14
ABCD3P28288 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ABCD3P28288 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ABCD3P28288 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ABCD3P28288 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.95■□□□□ 0.14
ABCD3P28288 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ABCD3P28288 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ABCD3P28288 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
ABCD3P28288 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ABCD3P28288 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ABCD3P28288 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ABCD3P28288 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ABCD3P28288 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ABCD3P28288 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.94■□□□□ 0.14
ABCD3P28288 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.94■□□□□ 0.14
ABCD3P28288 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ABCD3P28288 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.94■□□□□ 0.14
ABCD3P28288 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ABCD3P28288 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ABCD3P28288 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ABCD3P28288 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.94■□□□□ 0.14
ABCD3P28288 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
ABCD3P28288 AC139713.2-201ENST00000641328 2723 ntBASIC15.94■□□□□ 0.14
ABCD3P28288 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.94■□□□□ 0.14
ABCD3P28288 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ABCD3P28288 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.94■□□□□ 0.14
ABCD3P28288 RNA5SP419-201ENST00000515908 135 ntBASIC15.94■□□□□ 0.14
ABCD3P28288 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.94■□□□□ 0.14
ABCD3P28288 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.94■□□□□ 0.14
ABCD3P28288 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ABCD3P28288 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.94■□□□□ 0.14
ABCD3P28288 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.94■□□□□ 0.14
ABCD3P28288 AC004706.3-202ENST00000621574 984 ntBASIC15.94■□□□□ 0.14
ABCD3P28288 AC008735.5-201ENST00000623544 497 ntBASIC15.94■□□□□ 0.14
ABCD3P28288 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
ABCD3P28288 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.94■□□□□ 0.14
ABCD3P28288 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms