Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCLP19338 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCLP19338 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCLP19338 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCLP19338 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NCLP19338 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCLP19338 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NCLP19338 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.68■□□□□ 0.9
NCLP19338 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCLP19338 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCLP19338 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.68■□□□□ 0.9
NCLP19338 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NCLP19338 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.68■□□□□ 0.9
NCLP19338 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.67■□□□□ 0.9
NCLP19338 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCLP19338 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.67■□□□□ 0.9
NCLP19338 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCLP19338 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCLP19338 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCLP19338 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC20.67■□□□□ 0.9
NCLP19338 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.67■□□□□ 0.9
NCLP19338 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCLP19338 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.67■□□□□ 0.9
NCLP19338 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC20.67■□□□□ 0.9
NCLP19338 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NCLP19338 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.67■□□□□ 0.9
NCLP19338 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCLP19338 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.67■□□□□ 0.9
NCLP19338 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NCLP19338 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NCLP19338 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.67■□□□□ 0.9
NCLP19338 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.67■□□□□ 0.9
NCLP19338 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCLP19338 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NCLP19338 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCLP19338 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.67■□□□□ 0.9
NCLP19338 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC20.67■□□□□ 0.9
NCLP19338 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
NCLP19338 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.67■□□□□ 0.9
NCLP19338 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NCLP19338 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NCLP19338 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.67■□□□□ 0.9
NCLP19338 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NCLP19338 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
NCLP19338 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NCLP19338 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NCLP19338 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCLP19338 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
NCLP19338 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCLP19338 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NCLP19338 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCLP19338 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.66■□□□□ 0.9
NCLP19338 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCLP19338 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCLP19338 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NCLP19338 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.66■□□□□ 0.9
NCLP19338 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NCLP19338 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NCLP19338 HLA-J-201ENST00000462773 1622 ntBASIC20.66■□□□□ 0.9
NCLP19338 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NCLP19338 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
NCLP19338 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.66■□□□□ 0.9
NCLP19338 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.66■□□□□ 0.9
NCLP19338 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NCLP19338 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
NCLP19338 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
NCLP19338 LINC00304-203ENST00000565008 1864 ntBASIC20.66■□□□□ 0.9
NCLP19338 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
NCLP19338 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NCLP19338 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
NCLP19338 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NCLP19338 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
NCLP19338 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
NCLP19338 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NCLP19338 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCLP19338 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCLP19338 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
NCLP19338 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NCLP19338 AGGF1P2-201ENST00000426656 2106 ntBASIC20.65■□□□□ 0.9
NCLP19338 AC009949.1-201ENST00000623048 1830 ntBASIC20.65■□□□□ 0.9
NCLP19338 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCLP19338 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.65■□□□□ 0.9
NCLP19338 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NCLP19338 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NCLP19338 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NCLP19338 LINC00167-201ENST00000530583 1419 ntBASIC20.65■□□□□ 0.9
NCLP19338 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCLP19338 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.65■□□□□ 0.9
NCLP19338 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCLP19338 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NCLP19338 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NCLP19338 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.65■□□□□ 0.9
NCLP19338 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NCLP19338 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.65■□□□□ 0.9
NCLP19338 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.65■□□□□ 0.9
NCLP19338 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.65■□□□□ 0.9
NCLP19338 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.65■□□□□ 0.9
NCLP19338 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.65■□□□□ 0.9
NCLP19338 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.65■□□□□ 0.9
NCLP19338 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms