Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 AL691432.3-201ENST00000621860 400 ntBASIC15.13■□□□□ 0.01
CCL2P13500 AL355877.3-201ENST00000622820 899 ntBASIC15.13■□□□□ 0.01
CCL2P13500 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL2P13500 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
CCL2P13500 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL2P13500 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL2P13500 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CCL2P13500 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL2P13500 AL645608.8-201ENST00000606034 2086 ntBASIC15.13■□□□□ 0.01
CCL2P13500 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
CCL2P13500 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL2P13500 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL2P13500 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL2P13500 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.13■□□□□ 0.01
CCL2P13500 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.12■□□□□ 0.01
CCL2P13500 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.12■□□□□ 0.01
CCL2P13500 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.12■□□□□ 0.01
CCL2P13500 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL2P13500 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCL2P13500 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL2P13500 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL2P13500 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCL2P13500 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.12■□□□□ 0.01
CCL2P13500 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.12■□□□□ 0.01
CCL2P13500 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.12■□□□□ 0.01
CCL2P13500 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL2P13500 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CCL2P13500 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.12■□□□□ 0.01
CCL2P13500 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL2P13500 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL2P13500 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCL2P13500 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCL2P13500 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL2P13500 RBM17P3-201ENST00000417687 1192 ntBASIC15.12■□□□□ 0.01
CCL2P13500 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.12■□□□□ 0.01
CCL2P13500 AC079781.3-201ENST00000449110 356 ntBASIC15.12■□□□□ 0.01
CCL2P13500 FGFR3P6-201ENST00000457012 610 ntBASIC15.12■□□□□ 0.01
CCL2P13500 SART3-203ENST00000546611 1184 ntBASIC15.12■□□□□ 0.01
CCL2P13500 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCL2P13500 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
CCL2P13500 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.12■□□□□ 0.01
CCL2P13500 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.12■□□□□ 0.01
CCL2P13500 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL2P13500 AC079776.2-201ENST00000641154 1609 ntBASIC15.12■□□□□ 0.01
CCL2P13500 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL2P13500 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCL2P13500 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL2P13500 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.12■□□□□ 0.01
CCL2P13500 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL2P13500 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL2P13500 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CCL2P13500 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL2P13500 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCL2P13500 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
CCL2P13500 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCL2P13500 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL2P13500 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCL2P13500 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.11■□□□□ 0.01
CCL2P13500 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.11■□□□□ 0.01
CCL2P13500 AL356309.3-201ENST00000624132 1934 ntBASIC15.11■□□□□ 0.01
CCL2P13500 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCL2P13500 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL2P13500 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CCL2P13500 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL2P13500 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CCL2P13500 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL2P13500 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CCL2P13500 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CCL2P13500 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CCL2P13500 AC004870.1-201ENST00000315132 882 ntBASIC15.11■□□□□ 0.01
CCL2P13500 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.11■□□□□ 0.01
CCL2P13500 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCL2P13500 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.11■□□□□ 0.01
CCL2P13500 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL2P13500 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL2P13500 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
CCL2P13500 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.11■□□□□ 0.01
CCL2P13500 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.11■□□□□ 0.01
CCL2P13500 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.11■□□□□ 0.01
CCL2P13500 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.11■□□□□ 0.01
CCL2P13500 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL2P13500 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.11■□□□□ 0.01
CCL2P13500 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.11■□□□□ 0.01
CCL2P13500 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL2P13500 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL2P13500 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL2P13500 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL2P13500 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL2P13500 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL2P13500 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCL2P13500 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.11■□□□□ 0.01
CCL2P13500 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCL2P13500 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCL2P13500 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL2P13500 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.11■□□□□ 0.01
CCL2P13500 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL2P13500 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL2P13500 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCL2P13500 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.11■□□□□ 0.01
CCL2P13500 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms