Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
PEPDP12955 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.08■□□□□ 0.17
PEPDP12955 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
PEPDP12955 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PEPDP12955 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PEPDP12955 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.08■□□□□ 0.17
PEPDP12955 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PEPDP12955 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEPDP12955 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PEPDP12955 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PEPDP12955 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEPDP12955 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEPDP12955 NUS1P2-201ENST00000417358 873 ntBASIC16.08■□□□□ 0.16
PEPDP12955 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PEPDP12955 TPM4P1-201ENST00000436100 807 ntBASIC16.08■□□□□ 0.16
PEPDP12955 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEPDP12955 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEPDP12955 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.08■□□□□ 0.16
PEPDP12955 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PEPDP12955 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.08■□□□□ 0.16
PEPDP12955 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.08■□□□□ 0.16
PEPDP12955 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PEPDP12955 AC097374.2-201ENST00000618617 1306 ntBASIC16.08■□□□□ 0.16
PEPDP12955 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PEPDP12955 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.08■□□□□ 0.16
PEPDP12955 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.08■□□□□ 0.16
PEPDP12955 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEPDP12955 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
PEPDP12955 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.08■□□□□ 0.16
PEPDP12955 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PEPDP12955 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEPDP12955 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEPDP12955 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEPDP12955 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEPDP12955 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.08■□□□□ 0.16
PEPDP12955 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.08■□□□□ 0.16
PEPDP12955 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PEPDP12955 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.07■□□□□ 0.16
PEPDP12955 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PEPDP12955 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PEPDP12955 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.07■□□□□ 0.16
PEPDP12955 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEPDP12955 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PEPDP12955 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEPDP12955 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PEPDP12955 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PEPDP12955 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.07■□□□□ 0.16
PEPDP12955 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.07■□□□□ 0.16
PEPDP12955 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.07■□□□□ 0.16
PEPDP12955 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.07■□□□□ 0.16
PEPDP12955 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.07■□□□□ 0.16
PEPDP12955 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.07■□□□□ 0.16
PEPDP12955 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.07■□□□□ 0.16
PEPDP12955 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.07■□□□□ 0.16
PEPDP12955 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.07■□□□□ 0.16
PEPDP12955 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PEPDP12955 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PEPDP12955 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PEPDP12955 IFNL4P1-201ENST00000607083 540 ntBASIC16.07■□□□□ 0.16
PEPDP12955 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PEPDP12955 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.07■□□□□ 0.16
PEPDP12955 AC114341.1-201ENST00000618070 349 ntBASIC16.07■□□□□ 0.16
PEPDP12955 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEPDP12955 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEPDP12955 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.07■□□□□ 0.16
PEPDP12955 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEPDP12955 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PEPDP12955 TP73-AS1-210ENST00000637775 1455 ntBASIC16.07■□□□□ 0.16
PEPDP12955 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.07■□□□□ 0.16
PEPDP12955 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEPDP12955 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PEPDP12955 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.07■□□□□ 0.16
PEPDP12955 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PEPDP12955 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.07■□□□□ 0.16
PEPDP12955 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEPDP12955 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEPDP12955 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PEPDP12955 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.07■□□□□ 0.16
PEPDP12955 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PEPDP12955 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEPDP12955 CROCCP2-202ENST00000412962 2773 ntBASIC16.07■□□□□ 0.16
PEPDP12955 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PEPDP12955 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEPDP12955 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PEPDP12955 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
PEPDP12955 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.06■□□□□ 0.16
PEPDP12955 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEPDP12955 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PEPDP12955 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.06■□□□□ 0.16
PEPDP12955 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.06■□□□□ 0.16
PEPDP12955 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEPDP12955 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEPDP12955 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEPDP12955 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.06■□□□□ 0.16
PEPDP12955 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEPDP12955 AC004870.1-201ENST00000315132 882 ntBASIC16.06■□□□□ 0.16
PEPDP12955 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.06■□□□□ 0.16
PEPDP12955 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.06■□□□□ 0.16
PEPDP12955 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.06■□□□□ 0.16
PEPDP12955 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms