Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CHRNB1P11230 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNB1P11230 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.5■□□□□ 0.39
CHRNB1P11230 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNB1P11230 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.5■□□□□ 0.39
CHRNB1P11230 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNB1P11230 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNB1P11230 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNB1P11230 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNB1P11230 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.5■□□□□ 0.39
CHRNB1P11230 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNB1P11230 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNB1P11230 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.49■□□□□ 0.39
CHRNB1P11230 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.49■□□□□ 0.39
CHRNB1P11230 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.49■□□□□ 0.39
CHRNB1P11230 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNB1P11230 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNB1P11230 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNB1P11230 AC104581.1-202ENST00000635932 2618 ntBASIC17.49■□□□□ 0.39
CHRNB1P11230 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNB1P11230 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.49■□□□□ 0.39
CHRNB1P11230 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHRNB1P11230 AC067863.1-201ENST00000494933 530 ntBASIC17.49■□□□□ 0.39
CHRNB1P11230 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.49■□□□□ 0.39
CHRNB1P11230 RNA5SP421-201ENST00000516864 134 ntBASIC17.49■□□□□ 0.39
CHRNB1P11230 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.49■□□□□ 0.39
CHRNB1P11230 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNB1P11230 AC069262.1-201ENST00000539058 672 ntBASIC17.49■□□□□ 0.39
CHRNB1P11230 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.49■□□□□ 0.39
CHRNB1P11230 DUX4L27-201ENST00000554796 1261 ntBASIC17.49■□□□□ 0.39
CHRNB1P11230 AJ011932.1-201ENST00000621707 465 ntBASIC17.49■□□□□ 0.39
CHRNB1P11230 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNB1P11230 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.49■□□□□ 0.39
CHRNB1P11230 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNB1P11230 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNB1P11230 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.49■□□□□ 0.39
CHRNB1P11230 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNB1P11230 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHRNB1P11230 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CHRNB1P11230 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.49■□□□□ 0.39
CHRNB1P11230 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNB1P11230 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.49■□□□□ 0.39
CHRNB1P11230 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHRNB1P11230 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHRNB1P11230 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNB1P11230 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNB1P11230 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CHRNB1P11230 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNB1P11230 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.48■□□□□ 0.39
CHRNB1P11230 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNB1P11230 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNB1P11230 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CHRNB1P11230 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNB1P11230 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNB1P11230 AL355306.1-201ENST00000415580 579 ntBASIC17.48■□□□□ 0.39
CHRNB1P11230 AL671277.1-201ENST00000429656 993 ntBASIC17.48■□□□□ 0.39
CHRNB1P11230 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.48■□□□□ 0.39
CHRNB1P11230 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNB1P11230 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNB1P11230 SLC25A6P2-201ENST00000497974 877 ntBASIC17.48■□□□□ 0.39
CHRNB1P11230 KRT8P48-201ENST00000515599 1220 ntBASIC17.48■□□□□ 0.39
CHRNB1P11230 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNB1P11230 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNB1P11230 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.48■□□□□ 0.39
CHRNB1P11230 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.48■□□□□ 0.39
CHRNB1P11230 AC099522.2-201ENST00000607001 744 ntBASIC17.48■□□□□ 0.39
CHRNB1P11230 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.48■□□□□ 0.39
CHRNB1P11230 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNB1P11230 Z92544.3-201ENST00000624747 417 ntBASIC17.48■□□□□ 0.39
CHRNB1P11230 AC135776.1-201ENST00000319817 2481 ntBASIC17.48■□□□□ 0.39
CHRNB1P11230 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.48■□□□□ 0.39
CHRNB1P11230 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHRNB1P11230 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNB1P11230 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNB1P11230 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNB1P11230 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.48■□□□□ 0.39
CHRNB1P11230 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CHRNB1P11230 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CHRNB1P11230 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNB1P11230 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNB1P11230 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNB1P11230 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNB1P11230 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNB1P11230 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNB1P11230 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNB1P11230 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNB1P11230 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CHRNB1P11230 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNB1P11230 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHRNB1P11230 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNB1P11230 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNB1P11230 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNB1P11230 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.47■□□□□ 0.39
CHRNB1P11230 FAM86C2P-203ENST00000528684 1004 ntBASIC17.47■□□□□ 0.39
CHRNB1P11230 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNB1P11230 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.47■□□□□ 0.39
CHRNB1P11230 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.47■□□□□ 0.39
CHRNB1P11230 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.47■□□□□ 0.39
CHRNB1P11230 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.47■□□□□ 0.39
CHRNB1P11230 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms