Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AC139887.3-201ENST00000568585 713 ntBASIC17.41■□□□□ 0.38
MMP2P08253 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.41■□□□□ 0.38
MMP2P08253 AL139424.1-201ENST00000607572 797 ntBASIC17.41■□□□□ 0.38
MMP2P08253 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.41■□□□□ 0.38
MMP2P08253 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP2P08253 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP2P08253 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MMP2P08253 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP2P08253 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.41■□□□□ 0.38
MMP2P08253 FRMD8P1-201ENST00000440433 1524 ntBASIC17.41■□□□□ 0.38
MMP2P08253 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP2P08253 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
MMP2P08253 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP2P08253 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP2P08253 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.4■□□□□ 0.38
MMP2P08253 AC020916.1-201ENST00000587762 1774 ntBASIC17.4■□□□□ 0.38
MMP2P08253 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP2P08253 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP2P08253 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
MMP2P08253 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP2P08253 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.4■□□□□ 0.38
MMP2P08253 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
MMP2P08253 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP2P08253 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
MMP2P08253 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.4■□□□□ 0.38
MMP2P08253 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP2P08253 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP2P08253 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP2P08253 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP2P08253 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
MMP2P08253 GPR89P-201ENST00000407924 1495 ntBASIC17.4■□□□□ 0.38
MMP2P08253 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP2P08253 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP2P08253 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.4■□□□□ 0.38
MMP2P08253 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.4■□□□□ 0.38
MMP2P08253 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.4■□□□□ 0.38
MMP2P08253 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.4■□□□□ 0.38
MMP2P08253 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.4■□□□□ 0.38
MMP2P08253 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.4■□□□□ 0.38
MMP2P08253 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.4■□□□□ 0.38
MMP2P08253 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
MMP2P08253 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP2P08253 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MMP2P08253 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
MMP2P08253 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MMP2P08253 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
MMP2P08253 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
MMP2P08253 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.38
MMP2P08253 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
MMP2P08253 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP2P08253 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MMP2P08253 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP2P08253 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP2P08253 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.39■□□□□ 0.37
MMP2P08253 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP2P08253 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.39■□□□□ 0.37
MMP2P08253 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.39■□□□□ 0.37
MMP2P08253 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP2P08253 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
MMP2P08253 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MMP2P08253 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP2P08253 LAGE3P1-201ENST00000425356 484 ntBASIC17.39■□□□□ 0.37
MMP2P08253 KRT18P27-201ENST00000427733 1299 ntBASIC17.39■□□□□ 0.37
MMP2P08253 KRT18P67-201ENST00000432816 1264 ntBASIC17.39■□□□□ 0.37
MMP2P08253 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.39■□□□□ 0.37
MMP2P08253 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.39■□□□□ 0.37
MMP2P08253 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.39■□□□□ 0.37
MMP2P08253 AC073648.2-201ENST00000510116 352 ntBASIC17.39■□□□□ 0.37
MMP2P08253 AL160237.2-201ENST00000556165 472 ntBASIC17.39■□□□□ 0.37
MMP2P08253 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP2P08253 AC006504.4-201ENST00000592118 1568 ntBASIC17.39■□□□□ 0.37
MMP2P08253 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MMP2P08253 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.39■□□□□ 0.37
MMP2P08253 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MMP2P08253 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP2P08253 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP2P08253 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.39■□□□□ 0.37
MMP2P08253 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP2P08253 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MMP2P08253 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.38■□□□□ 0.37
MMP2P08253 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MMP2P08253 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MMP2P08253 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
MMP2P08253 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP2P08253 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.38■□□□□ 0.37
MMP2P08253 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.38■□□□□ 0.37
MMP2P08253 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MMP2P08253 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.38■□□□□ 0.37
MMP2P08253 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.38■□□□□ 0.37
MMP2P08253 AC073621.1-201ENST00000392730 636 ntBASIC17.38■□□□□ 0.37
MMP2P08253 MRPL3P1-201ENST00000400109 1033 ntBASIC17.38■□□□□ 0.37
MMP2P08253 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.38■□□□□ 0.37
MMP2P08253 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.38■□□□□ 0.37
MMP2P08253 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.38■□□□□ 0.37
MMP2P08253 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.38■□□□□ 0.37
MMP2P08253 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.38■□□□□ 0.37
MMP2P08253 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.38■□□□□ 0.37
MMP2P08253 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MMP2P08253 OR7E14P-202ENST00000530490 1290 ntBASIC17.38■□□□□ 0.37
MMP2P08253 AC124947.2-201ENST00000547118 1133 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms