Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC22.51■■□□□ 1.19
COL5A2P05997 AL138828.2-201ENST00000615812 383 ntBASIC22.51■■□□□ 1.19
COL5A2P05997 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL5A2P05997 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
COL5A2P05997 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL5A2P05997 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL5A2P05997 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC22.51■■□□□ 1.19
COL5A2P05997 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL5A2P05997 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC22.51■■□□□ 1.19
COL5A2P05997 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
COL5A2P05997 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL5A2P05997 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
COL5A2P05997 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL5A2P05997 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC22.5■■□□□ 1.19
COL5A2P05997 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL5A2P05997 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC22.5■■□□□ 1.19
COL5A2P05997 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL5A2P05997 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL5A2P05997 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
COL5A2P05997 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC22.5■■□□□ 1.19
COL5A2P05997 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL5A2P05997 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC22.5■■□□□ 1.19
COL5A2P05997 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
COL5A2P05997 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC22.5■■□□□ 1.19
COL5A2P05997 AC027369.6-201ENST00000525520 931 ntBASIC22.5■■□□□ 1.19
COL5A2P05997 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC22.5■■□□□ 1.19
COL5A2P05997 AC091167.2-201ENST00000579581 588 ntBASIC22.5■■□□□ 1.19
COL5A2P05997 AL359881.2-201ENST00000602973 570 ntBASIC22.5■■□□□ 1.19
COL5A2P05997 AC007967.4-201ENST00000614700 386 ntBASIC22.5■■□□□ 1.19
COL5A2P05997 MIR6752-201ENST00000618442 71 ntBASIC22.5■■□□□ 1.19
COL5A2P05997 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
COL5A2P05997 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL5A2P05997 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
COL5A2P05997 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
COL5A2P05997 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL5A2P05997 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL5A2P05997 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL5A2P05997 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL5A2P05997 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC22.49■■□□□ 1.19
COL5A2P05997 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
COL5A2P05997 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC22.49■■□□□ 1.19
COL5A2P05997 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL5A2P05997 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL5A2P05997 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC22.49■■□□□ 1.19
COL5A2P05997 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC22.49■■□□□ 1.19
COL5A2P05997 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC22.49■■□□□ 1.19
COL5A2P05997 AC009477.1-201ENST00000452936 217 ntBASIC22.49■■□□□ 1.19
COL5A2P05997 LY6E-204ENST00000519546 971 ntTSL 2 BASIC22.49■■□□□ 1.19
COL5A2P05997 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC22.49■■□□□ 1.19
COL5A2P05997 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC22.49■■□□□ 1.19
COL5A2P05997 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC22.49■■□□□ 1.19
COL5A2P05997 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC22.49■■□□□ 1.19
COL5A2P05997 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC22.49■■□□□ 1.19
COL5A2P05997 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC22.49■■□□□ 1.19
COL5A2P05997 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL5A2P05997 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC22.49■■□□□ 1.19
COL5A2P05997 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL5A2P05997 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC22.48■■□□□ 1.19
COL5A2P05997 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL5A2P05997 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL5A2P05997 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL5A2P05997 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC22.48■■□□□ 1.19
COL5A2P05997 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL5A2P05997 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL5A2P05997 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL5A2P05997 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC22.48■■□□□ 1.19
COL5A2P05997 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC22.48■■□□□ 1.19
COL5A2P05997 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL5A2P05997 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC22.48■■□□□ 1.19
COL5A2P05997 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC22.48■■□□□ 1.19
COL5A2P05997 RARRES2P9-201ENST00000565168 469 ntBASIC22.48■■□□□ 1.19
COL5A2P05997 AL138918.1-201ENST00000568306 659 ntBASIC22.48■■□□□ 1.19
COL5A2P05997 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC22.48■■□□□ 1.19
COL5A2P05997 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL5A2P05997 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC22.48■■□□□ 1.19
COL5A2P05997 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL5A2P05997 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC22.48■■□□□ 1.19
COL5A2P05997 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
COL5A2P05997 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
COL5A2P05997 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
COL5A2P05997 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL5A2P05997 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC22.48■■□□□ 1.19
COL5A2P05997 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL5A2P05997 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL5A2P05997 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL5A2P05997 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC22.47■■□□□ 1.19
COL5A2P05997 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC22.47■■□□□ 1.19
COL5A2P05997 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC22.47■■□□□ 1.19
COL5A2P05997 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL5A2P05997 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL5A2P05997 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC22.47■■□□□ 1.19
COL5A2P05997 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC22.47■■□□□ 1.19
COL5A2P05997 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
COL5A2P05997 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC22.47■■□□□ 1.19
COL5A2P05997 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL5A2P05997 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
COL5A2P05997 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
COL5A2P05997 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL5A2P05997 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL5A2P05997 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms