Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB4AP04350 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB4AP04350 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB4AP04350 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB4AP04350 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB4AP04350 TSPY17P-201ENST00000450329 467 ntBASIC18.6■□□□□ 0.57
TUBB4AP04350 AC097488.1-201ENST00000507834 756 ntBASIC18.6■□□□□ 0.57
TUBB4AP04350 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.6■□□□□ 0.57
TUBB4AP04350 RN7SL471P-201ENST00000580476 299 ntBASIC18.6■□□□□ 0.57
TUBB4AP04350 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TUBB4AP04350 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB4AP04350 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB4AP04350 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB4AP04350 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB4AP04350 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB4AP04350 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TUBB4AP04350 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TUBB4AP04350 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
TUBB4AP04350 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.6■□□□□ 0.57
TUBB4AP04350 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.6■□□□□ 0.57
TUBB4AP04350 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB4AP04350 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TUBB4AP04350 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TUBB4AP04350 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TUBB4AP04350 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB4AP04350 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TUBB4AP04350 AC132872.4-202ENST00000622924 2756 ntBASIC18.59■□□□□ 0.57
TUBB4AP04350 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
TUBB4AP04350 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB4AP04350 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB4AP04350 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB4AP04350 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB4AP04350 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.59■□□□□ 0.57
TUBB4AP04350 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB4AP04350 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TUBB4AP04350 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB4AP04350 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB4AP04350 PRORSD1P-201ENST00000295112 541 ntBASIC18.59■□□□□ 0.57
TUBB4AP04350 MYCLP1-201ENST00000372451 1075 ntBASIC18.59■□□□□ 0.57
TUBB4AP04350 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB4AP04350 AC116562.2-201ENST00000507042 360 ntBASIC18.59■□□□□ 0.57
TUBB4AP04350 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.59■□□□□ 0.57
TUBB4AP04350 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.59■□□□□ 0.57
TUBB4AP04350 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.59■□□□□ 0.57
TUBB4AP04350 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TUBB4AP04350 AC126177.1-201ENST00000547829 2218 ntBASIC18.59■□□□□ 0.57
TUBB4AP04350 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB4AP04350 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB4AP04350 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.59■□□□□ 0.57
TUBB4AP04350 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.59■□□□□ 0.57
TUBB4AP04350 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB4AP04350 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB4AP04350 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.59■□□□□ 0.57
TUBB4AP04350 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TUBB4AP04350 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.59■□□□□ 0.57
TUBB4AP04350 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.58■□□□□ 0.57
TUBB4AP04350 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.58■□□□□ 0.57
TUBB4AP04350 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.58■□□□□ 0.57
TUBB4AP04350 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.58■□□□□ 0.57
TUBB4AP04350 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.58■□□□□ 0.57
TUBB4AP04350 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
TUBB4AP04350 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.58■□□□□ 0.57
TUBB4AP04350 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TUBB4AP04350 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.58■□□□□ 0.57
TUBB4AP04350 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.58■□□□□ 0.57
TUBB4AP04350 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TUBB4AP04350 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TUBB4AP04350 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
TUBB4AP04350 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.58■□□□□ 0.57
TUBB4AP04350 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.58■□□□□ 0.56
TUBB4AP04350 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.58■□□□□ 0.56
TUBB4AP04350 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TUBB4AP04350 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TUBB4AP04350 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
TUBB4AP04350 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TUBB4AP04350 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TUBB4AP04350 AC128676.1-201ENST00000454392 318 ntBASIC18.58■□□□□ 0.56
TUBB4AP04350 AP003041.3-201ENST00000527151 707 ntBASIC18.58■□□□□ 0.56
TUBB4AP04350 AL353719.1-201ENST00000566847 864 ntBASIC18.58■□□□□ 0.56
TUBB4AP04350 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TUBB4AP04350 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TUBB4AP04350 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TUBB4AP04350 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TUBB4AP04350 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TUBB4AP04350 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TUBB4AP04350 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.58■□□□□ 0.56
TUBB4AP04350 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.58■□□□□ 0.56
TUBB4AP04350 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TUBB4AP04350 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TUBB4AP04350 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TUBB4AP04350 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TUBB4AP04350 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TUBB4AP04350 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TUBB4AP04350 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.57■□□□□ 0.56
TUBB4AP04350 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TUBB4AP04350 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.57■□□□□ 0.56
TUBB4AP04350 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TUBB4AP04350 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TUBB4AP04350 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TUBB4AP04350 PVRIG2P-201ENST00000435460 978 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms