Protein–RNA interactions for Protein: O60293

ZFC3H1, Zinc finger C3H1 domain-containing protein, humanhuman

Known RBP Predictions only

Length 1,989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1O60293 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.11■□□□□ 0.33
ZFC3H1O60293 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.11■□□□□ 0.33
ZFC3H1O60293 AC007967.2-201ENST00000432613 625 ntBASIC17.11■□□□□ 0.33
ZFC3H1O60293 RNPS1P1-201ENST00000507437 918 ntBASIC17.11■□□□□ 0.33
ZFC3H1O60293 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.11■□□□□ 0.33
ZFC3H1O60293 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.11■□□□□ 0.33
ZFC3H1O60293 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZFC3H1O60293 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
ZFC3H1O60293 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.11■□□□□ 0.33
ZFC3H1O60293 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ZFC3H1O60293 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.11■□□□□ 0.33
ZFC3H1O60293 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZFC3H1O60293 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZFC3H1O60293 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ZFC3H1O60293 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZFC3H1O60293 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.11■□□□□ 0.33
ZFC3H1O60293 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.11■□□□□ 0.33
ZFC3H1O60293 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
ZFC3H1O60293 NKILA-202ENST00000614771 2598 ntBASIC17.11■□□□□ 0.33
ZFC3H1O60293 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZFC3H1O60293 AL049757.1-201ENST00000616842 1596 ntBASIC17.11■□□□□ 0.33
ZFC3H1O60293 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.11■□□□□ 0.33
ZFC3H1O60293 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZFC3H1O60293 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZFC3H1O60293 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZFC3H1O60293 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.11■□□□□ 0.33
ZFC3H1O60293 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZFC3H1O60293 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZFC3H1O60293 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZFC3H1O60293 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZFC3H1O60293 ELK2BP-201ENST00000415014 1224 ntBASIC17.11■□□□□ 0.33
ZFC3H1O60293 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.11■□□□□ 0.33
ZFC3H1O60293 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.11■□□□□ 0.33
ZFC3H1O60293 AC092910.1-201ENST00000482027 1129 ntBASIC17.11■□□□□ 0.33
ZFC3H1O60293 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.11■□□□□ 0.33
ZFC3H1O60293 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.11■□□□□ 0.33
ZFC3H1O60293 AC140113.2-201ENST00000604370 208 ntBASIC17.11■□□□□ 0.33
ZFC3H1O60293 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
ZFC3H1O60293 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZFC3H1O60293 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.11■□□□□ 0.33
ZFC3H1O60293 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZFC3H1O60293 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZFC3H1O60293 CROCCP2-202ENST00000412962 2773 ntBASIC17.11■□□□□ 0.33
ZFC3H1O60293 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZFC3H1O60293 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZFC3H1O60293 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZFC3H1O60293 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZFC3H1O60293 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZFC3H1O60293 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZFC3H1O60293 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.1■□□□□ 0.33
ZFC3H1O60293 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZFC3H1O60293 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZFC3H1O60293 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZFC3H1O60293 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZFC3H1O60293 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ZFC3H1O60293 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZFC3H1O60293 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZFC3H1O60293 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.1■□□□□ 0.33
ZFC3H1O60293 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.1■□□□□ 0.33
ZFC3H1O60293 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZFC3H1O60293 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.1■□□□□ 0.33
ZFC3H1O60293 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.1■□□□□ 0.33
ZFC3H1O60293 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.1■□□□□ 0.33
ZFC3H1O60293 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.1■□□□□ 0.33
ZFC3H1O60293 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.1■□□□□ 0.33
ZFC3H1O60293 AC117500.6-201ENST00000624871 588 ntBASIC17.1■□□□□ 0.33
ZFC3H1O60293 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZFC3H1O60293 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZFC3H1O60293 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ZFC3H1O60293 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
ZFC3H1O60293 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZFC3H1O60293 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZFC3H1O60293 AC108073.2-201ENST00000464002 357 ntBASIC17.09■□□□□ 0.33
ZFC3H1O60293 AC136632.2-201ENST00000512891 861 ntBASIC17.09■□□□□ 0.33
ZFC3H1O60293 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZFC3H1O60293 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.09■□□□□ 0.33
ZFC3H1O60293 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ZFC3H1O60293 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZFC3H1O60293 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZFC3H1O60293 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZFC3H1O60293 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZFC3H1O60293 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZFC3H1O60293 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ZFC3H1O60293 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZFC3H1O60293 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.09■□□□□ 0.33
ZFC3H1O60293 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZFC3H1O60293 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZFC3H1O60293 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZFC3H1O60293 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZFC3H1O60293 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZFC3H1O60293 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZFC3H1O60293 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZFC3H1O60293 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.09■□□□□ 0.33
ZFC3H1O60293 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.09■□□□□ 0.33
ZFC3H1O60293 AC006557.2-201ENST00000592985 1240 ntBASIC17.09■□□□□ 0.33
ZFC3H1O60293 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.09■□□□□ 0.33
ZFC3H1O60293 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.09■□□□□ 0.33
ZFC3H1O60293 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.09■□□□□ 0.33
ZFC3H1O60293 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZFC3H1O60293 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms