Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.52■□□□□ 0.08
CXCL13O43927 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.52■□□□□ 0.08
CXCL13O43927 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.52■□□□□ 0.08
CXCL13O43927 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.52■□□□□ 0.08
CXCL13O43927 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.52■□□□□ 0.08
CXCL13O43927 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.52■□□□□ 0.08
CXCL13O43927 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.52■□□□□ 0.08
CXCL13O43927 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
CXCL13O43927 AC004706.3-202ENST00000621574 984 ntBASIC15.52■□□□□ 0.08
CXCL13O43927 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.52■□□□□ 0.08
CXCL13O43927 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
CXCL13O43927 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CXCL13O43927 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.52■□□□□ 0.07
CXCL13O43927 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CXCL13O43927 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
CXCL13O43927 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CXCL13O43927 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CXCL13O43927 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CXCL13O43927 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CXCL13O43927 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CXCL13O43927 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.52■□□□□ 0.07
CXCL13O43927 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CXCL13O43927 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CXCL13O43927 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.52■□□□□ 0.07
CXCL13O43927 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.52■□□□□ 0.07
CXCL13O43927 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CXCL13O43927 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CXCL13O43927 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL13O43927 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CXCL13O43927 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL13O43927 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL13O43927 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL13O43927 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL13O43927 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL13O43927 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL13O43927 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.51■□□□□ 0.07
CXCL13O43927 ACTG1P4-201ENST00000425123 1122 ntBASIC15.51■□□□□ 0.07
CXCL13O43927 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.51■□□□□ 0.07
CXCL13O43927 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.51■□□□□ 0.07
CXCL13O43927 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.51■□□□□ 0.07
CXCL13O43927 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.51■□□□□ 0.07
CXCL13O43927 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL13O43927 AL139424.1-201ENST00000607572 797 ntBASIC15.51■□□□□ 0.07
CXCL13O43927 AC120114.3-201ENST00000611923 658 ntBASIC15.51■□□□□ 0.07
CXCL13O43927 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.51■□□□□ 0.07
CXCL13O43927 MIR1199-201ENST00000621445 119 ntBASIC15.51■□□□□ 0.07
CXCL13O43927 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.51■□□□□ 0.07
CXCL13O43927 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL13O43927 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.51■□□□□ 0.07
CXCL13O43927 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CXCL13O43927 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CXCL13O43927 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL13O43927 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL13O43927 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CXCL13O43927 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CXCL13O43927 AC005332.8-201ENST00000622750 2735 ntBASIC15.51■□□□□ 0.07
CXCL13O43927 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
CXCL13O43927 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CXCL13O43927 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL13O43927 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL13O43927 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CXCL13O43927 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL13O43927 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
CXCL13O43927 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL13O43927 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL13O43927 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.5■□□□□ 0.07
CXCL13O43927 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL13O43927 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.5■□□□□ 0.07
CXCL13O43927 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL13O43927 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL13O43927 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL13O43927 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL13O43927 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL13O43927 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.5■□□□□ 0.07
CXCL13O43927 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.5■□□□□ 0.07
CXCL13O43927 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.5■□□□□ 0.07
CXCL13O43927 ELK2BP-201ENST00000415014 1224 ntBASIC15.5■□□□□ 0.07
CXCL13O43927 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.5■□□□□ 0.07
CXCL13O43927 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.5■□□□□ 0.07
CXCL13O43927 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.5■□□□□ 0.07
CXCL13O43927 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.5■□□□□ 0.07
CXCL13O43927 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.5■□□□□ 0.07
CXCL13O43927 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.5■□□□□ 0.07
CXCL13O43927 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.5■□□□□ 0.07
CXCL13O43927 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CXCL13O43927 AL353135.1-201ENST00000606729 504 ntBASIC15.5■□□□□ 0.07
CXCL13O43927 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL13O43927 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CXCL13O43927 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL13O43927 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.5■□□□□ 0.07
CXCL13O43927 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.5■□□□□ 0.07
CXCL13O43927 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL13O43927 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
CXCL13O43927 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL13O43927 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL13O43927 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL13O43927 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CXCL13O43927 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.5■□□□□ 0.07
CXCL13O43927 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.5■□□□□ 0.07
CXCL13O43927 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms