Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.99■□□□□ 0.47
MSI1O43347 AF228730.7-201ENST00000641842 219 ntBASIC17.99■□□□□ 0.47
MSI1O43347 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.99■□□□□ 0.47
MSI1O43347 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSI1O43347 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSI1O43347 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.99■□□□□ 0.47
MSI1O43347 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSI1O43347 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.99■□□□□ 0.47
MSI1O43347 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.99■□□□□ 0.47
MSI1O43347 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSI1O43347 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.99■□□□□ 0.47
MSI1O43347 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MSI1O43347 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSI1O43347 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.99■□□□□ 0.47
MSI1O43347 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MSI1O43347 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MSI1O43347 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MSI1O43347 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MSI1O43347 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MSI1O43347 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
MSI1O43347 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
MSI1O43347 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
MSI1O43347 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
MSI1O43347 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
MSI1O43347 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
MSI1O43347 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.98■□□□□ 0.47
MSI1O43347 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MSI1O43347 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
MSI1O43347 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.98■□□□□ 0.47
MSI1O43347 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MSI1O43347 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
MSI1O43347 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
MSI1O43347 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
MSI1O43347 RPL13AP23-201ENST00000480739 586 ntBASIC17.98■□□□□ 0.47
MSI1O43347 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.98■□□□□ 0.47
MSI1O43347 RNA5SP415-201ENST00000517246 115 ntBASIC17.98■□□□□ 0.47
MSI1O43347 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.98■□□□□ 0.47
MSI1O43347 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.98■□□□□ 0.47
MSI1O43347 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.98■□□□□ 0.47
MSI1O43347 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.98■□□□□ 0.47
MSI1O43347 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.98■□□□□ 0.47
MSI1O43347 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.98■□□□□ 0.47
MSI1O43347 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.98■□□□□ 0.47
MSI1O43347 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MSI1O43347 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MSI1O43347 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.98■□□□□ 0.47
MSI1O43347 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MSI1O43347 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
MSI1O43347 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.98■□□□□ 0.47
MSI1O43347 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
MSI1O43347 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
MSI1O43347 AC106820.2-201ENST00000563775 3264 ntBASIC17.98■□□□□ 0.47
MSI1O43347 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MSI1O43347 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
MSI1O43347 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
MSI1O43347 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.98■□□□□ 0.47
MSI1O43347 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.98■□□□□ 0.47
MSI1O43347 AC104109.2-201ENST00000602919 1418 ntBASIC17.98■□□□□ 0.47
MSI1O43347 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
MSI1O43347 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
MSI1O43347 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
MSI1O43347 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
MSI1O43347 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MSI1O43347 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
MSI1O43347 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MSI1O43347 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MSI1O43347 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.97■□□□□ 0.47
MSI1O43347 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.97■□□□□ 0.47
MSI1O43347 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MSI1O43347 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MSI1O43347 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MSI1O43347 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.97■□□□□ 0.47
MSI1O43347 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.97■□□□□ 0.47
MSI1O43347 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MSI1O43347 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MSI1O43347 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MSI1O43347 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MSI1O43347 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.97■□□□□ 0.47
MSI1O43347 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
MSI1O43347 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MSI1O43347 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
MSI1O43347 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.97■□□□□ 0.47
MSI1O43347 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MSI1O43347 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MSI1O43347 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
MSI1O43347 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.96■□□□□ 0.47
MSI1O43347 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MSI1O43347 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
MSI1O43347 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
MSI1O43347 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.96■□□□□ 0.47
MSI1O43347 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MSI1O43347 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.96■□□□□ 0.47
MSI1O43347 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MSI1O43347 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MSI1O43347 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MSI1O43347 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
MSI1O43347 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
MSI1O43347 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.96■□□□□ 0.47
MSI1O43347 UNC93B6-202ENST00000528242 690 ntBASIC17.96■□□□□ 0.47
MSI1O43347 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms