Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AC005104.2-201ENST00000427818 678 ntBASIC15.03■□□□□ -0
PHF1O43189 RN7SL606P-201ENST00000472779 293 ntBASIC15.03■□□□□ -0
PHF1O43189 AC093909.1-201ENST00000504731 1122 ntBASIC15.03■□□□□ -0
PHF1O43189 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.03■□□□□ -0
PHF1O43189 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.03■□□□□ -0
PHF1O43189 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.03■□□□□ -0
PHF1O43189 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.03■□□□□ -0
PHF1O43189 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PHF1O43189 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
PHF1O43189 REXO1L6P-202ENST00000619970 1078 ntBASIC15.03■□□□□ -0
PHF1O43189 TP73-AS1-207ENST00000624167 988 ntBASIC15.03■□□□□ -0
PHF1O43189 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PHF1O43189 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PHF1O43189 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PHF1O43189 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PHF1O43189 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.03■□□□□ -0
PHF1O43189 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PHF1O43189 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PHF1O43189 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PHF1O43189 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.03■□□□□ -0
PHF1O43189 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.03■□□□□ -0
PHF1O43189 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PHF1O43189 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PHF1O43189 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PHF1O43189 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PHF1O43189 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PHF1O43189 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PHF1O43189 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PHF1O43189 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
PHF1O43189 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PHF1O43189 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
PHF1O43189 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
PHF1O43189 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PHF1O43189 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.02■□□□□ -0
PHF1O43189 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PHF1O43189 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
PHF1O43189 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
PHF1O43189 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
PHF1O43189 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PHF1O43189 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
PHF1O43189 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PHF1O43189 FAM197Y8-203ENST00000450145 560 ntBASIC15.02■□□□□ -0
PHF1O43189 AC113404.2-201ENST00000507884 177 ntBASIC15.02■□□□□ -0
PHF1O43189 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.02■□□□□ -0
PHF1O43189 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.02■□□□□ -0
PHF1O43189 AF238378.1-201ENST00000526806 358 ntBASIC15.02■□□□□ -0
PHF1O43189 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PHF1O43189 AC106730.1-201ENST00000566722 1090 ntBASIC15.02■□□□□ -0
PHF1O43189 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.02■□□□□ -0
PHF1O43189 AC011840.4-201ENST00000578471 627 ntBASIC15.02■□□□□ -0
PHF1O43189 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
PHF1O43189 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PHF1O43189 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.02■□□□□ -0
PHF1O43189 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PHF1O43189 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.02■□□□□ -0
PHF1O43189 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
PHF1O43189 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHF1O43189 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHF1O43189 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHF1O43189 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHF1O43189 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PHF1O43189 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PHF1O43189 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.02□□□□□ -0.01
PHF1O43189 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHF1O43189 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHF1O43189 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHF1O43189 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHF1O43189 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHF1O43189 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PHF1O43189 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHF1O43189 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
PHF1O43189 KRT18P55-202ENST00000578578 1546 ntBASIC15.02□□□□□ -0.01
PHF1O43189 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHF1O43189 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHF1O43189 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PHF1O43189 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.01□□□□□ -0.01
PHF1O43189 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHF1O43189 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PHF1O43189 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHF1O43189 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHF1O43189 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHF1O43189 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHF1O43189 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PHF1O43189 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.01□□□□□ -0.01
PHF1O43189 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHF1O43189 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
PHF1O43189 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
PHF1O43189 AC124067.4-201ENST00000519691 2379 ntBASIC15.01□□□□□ -0.01
PHF1O43189 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHF1O43189 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
PHF1O43189 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.01□□□□□ -0.01
PHF1O43189 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHF1O43189 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.01□□□□□ -0.01
PHF1O43189 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.01□□□□□ -0.01
PHF1O43189 AL031284.1-201ENST00000419297 478 ntBASIC15.01□□□□□ -0.01
PHF1O43189 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.01□□□□□ -0.01
PHF1O43189 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.01□□□□□ -0.01
PHF1O43189 VENTXP7-201ENST00000475503 772 ntBASIC15.01□□□□□ -0.01
PHF1O43189 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.01□□□□□ -0.01
PHF1O43189 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms