Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AC004817.3-201ENST00000602957 2129 ntBASIC16.34■□□□□ 0.21
CLDN4O14493 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN4O14493 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN4O14493 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN4O14493 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CLDN4O14493 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN4O14493 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN4O14493 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN4O14493 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.34■□□□□ 0.21
CLDN4O14493 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.34■□□□□ 0.21
CLDN4O14493 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.34■□□□□ 0.21
CLDN4O14493 AP002469.2-201ENST00000531724 424 ntBASIC16.34■□□□□ 0.21
CLDN4O14493 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.34■□□□□ 0.21
CLDN4O14493 AC104692.2-201ENST00000603054 253 ntBASIC16.34■□□□□ 0.21
CLDN4O14493 AL589182.2-201ENST00000619332 1049 ntBASIC16.34■□□□□ 0.21
CLDN4O14493 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN4O14493 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN4O14493 AC097637.2-201ENST00000624096 1997 ntBASIC16.34■□□□□ 0.21
CLDN4O14493 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CLDN4O14493 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN4O14493 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN4O14493 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN4O14493 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN4O14493 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN4O14493 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CLDN4O14493 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN4O14493 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN4O14493 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN4O14493 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN4O14493 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN4O14493 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
CLDN4O14493 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN4O14493 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN4O14493 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDN4O14493 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN4O14493 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN4O14493 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN4O14493 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CLDN4O14493 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN4O14493 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN4O14493 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN4O14493 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN4O14493 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
CLDN4O14493 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN4O14493 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDN4O14493 AC139887.3-201ENST00000568585 713 ntBASIC16.33■□□□□ 0.2
CLDN4O14493 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN4O14493 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDN4O14493 TP73-AS1-207ENST00000624167 988 ntBASIC16.33■□□□□ 0.2
CLDN4O14493 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CLDN4O14493 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN4O14493 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDN4O14493 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN4O14493 NCF1C-201ENST00000438382 1427 ntBASIC16.33■□□□□ 0.2
CLDN4O14493 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.2
CLDN4O14493 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN4O14493 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
CLDN4O14493 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CLDN4O14493 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN4O14493 AL135999.2-201ENST00000622438 1686 ntBASIC16.33■□□□□ 0.2
CLDN4O14493 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN4O14493 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN4O14493 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN4O14493 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN4O14493 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN4O14493 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN4O14493 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDN4O14493 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN4O14493 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.32■□□□□ 0.2
CLDN4O14493 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CLDN4O14493 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN4O14493 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN4O14493 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN4O14493 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN4O14493 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN4O14493 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN4O14493 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN4O14493 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN4O14493 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN4O14493 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.32■□□□□ 0.2
CLDN4O14493 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN4O14493 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN4O14493 ACTG1P4-201ENST00000425123 1122 ntBASIC16.32■□□□□ 0.2
CLDN4O14493 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN4O14493 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN4O14493 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLDN4O14493 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.32■□□□□ 0.2
CLDN4O14493 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN4O14493 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.32■□□□□ 0.2
CLDN4O14493 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.32■□□□□ 0.2
CLDN4O14493 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN4O14493 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN4O14493 AL773604.1-201ENST00000617417 272 ntBASIC16.32■□□□□ 0.2
CLDN4O14493 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN4O14493 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.32■□□□□ 0.2
CLDN4O14493 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN4O14493 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN4O14493 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN4O14493 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CLDN4O14493 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms