Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
O00370 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
O00370 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
O00370 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
O00370 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
O00370 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.49■□□□□ 0.55
O00370 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
O00370 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.49■□□□□ 0.55
O00370 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.49■□□□□ 0.55
O00370 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.49■□□□□ 0.55
O00370 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.49■□□□□ 0.55
O00370 RN7SL510P-201ENST00000581311 263 ntBASIC18.49■□□□□ 0.55
O00370 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.49■□□□□ 0.55
O00370 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.49■□□□□ 0.55
O00370 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.49■□□□□ 0.55
O00370 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
O00370 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
O00370 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
O00370 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
O00370 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
O00370 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
O00370 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.49■□□□□ 0.55
O00370 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
O00370 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
O00370 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
O00370 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
O00370 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
O00370 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
O00370 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
O00370 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
O00370 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
O00370 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.49■□□□□ 0.55
O00370 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
O00370 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.49■□□□□ 0.55
O00370 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
O00370 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
O00370 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
O00370 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
O00370 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
O00370 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
O00370 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
O00370 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.48■□□□□ 0.55
O00370 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.48■□□□□ 0.55
O00370 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
O00370 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.48■□□□□ 0.55
O00370 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
O00370 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
O00370 AL691432.3-201ENST00000621860 400 ntBASIC18.48■□□□□ 0.55
O00370 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
O00370 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
O00370 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
O00370 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
O00370 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.48■□□□□ 0.55
O00370 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.48■□□□□ 0.55
O00370 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
O00370 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
O00370 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
O00370 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.48■□□□□ 0.55
O00370 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
O00370 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
O00370 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
O00370 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.48■□□□□ 0.55
O00370 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
O00370 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.47■□□□□ 0.55
O00370 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
O00370 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.47■□□□□ 0.55
O00370 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
O00370 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
O00370 AL356309.3-201ENST00000624132 1934 ntBASIC18.47■□□□□ 0.55
O00370 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
O00370 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
O00370 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
O00370 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
O00370 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
O00370 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
O00370 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
O00370 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
O00370 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
O00370 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.47■□□□□ 0.55
O00370 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
O00370 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
O00370 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.47■□□□□ 0.55
O00370 NKAPP1-205ENST00000585790 367 ntBASIC18.47■□□□□ 0.55
O00370 AL139288.1-201ENST00000623748 933 ntBASIC18.47■□□□□ 0.55
O00370 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
O00370 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.47■□□□□ 0.55
O00370 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
O00370 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
O00370 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.47■□□□□ 0.55
O00370 AC004817.3-201ENST00000602957 2129 ntBASIC18.47■□□□□ 0.55
O00370 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
O00370 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
O00370 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.47■□□□□ 0.55
O00370 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.47■□□□□ 0.55
O00370 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.47■□□□□ 0.55
O00370 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
O00370 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.46■□□□□ 0.55
O00370 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
O00370 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
O00370 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms