Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PDLIM1O00151 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM1O00151 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM1O00151 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM1O00151 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM1O00151 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.56■□□□□ 0.24
PDLIM1O00151 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM1O00151 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM1O00151 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM1O00151 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.56■□□□□ 0.24
PDLIM1O00151 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM1O00151 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.56■□□□□ 0.24
PDLIM1O00151 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.56■□□□□ 0.24
PDLIM1O00151 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM1O00151 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
PDLIM1O00151 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM1O00151 AC132872.4-202ENST00000622924 2756 ntBASIC16.55■□□□□ 0.24
PDLIM1O00151 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM1O00151 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM1O00151 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PDLIM1O00151 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM1O00151 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM1O00151 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM1O00151 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM1O00151 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM1O00151 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM1O00151 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM1O00151 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.55■□□□□ 0.24
PDLIM1O00151 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM1O00151 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.55■□□□□ 0.24
PDLIM1O00151 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM1O00151 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PDLIM1O00151 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM1O00151 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM1O00151 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM1O00151 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM1O00151 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.55■□□□□ 0.24
PDLIM1O00151 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM1O00151 WWOX-216ENST00000569818 525 ntBASIC16.55■□□□□ 0.24
PDLIM1O00151 RN7SL850P-201ENST00000579959 291 ntBASIC16.55■□□□□ 0.24
PDLIM1O00151 LINC01451-201ENST00000623792 534 ntBASIC16.55■□□□□ 0.24
PDLIM1O00151 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PDLIM1O00151 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PDLIM1O00151 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM1O00151 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
PDLIM1O00151 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.55■□□□□ 0.24
PDLIM1O00151 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM1O00151 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.54■□□□□ 0.24
PDLIM1O00151 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PDLIM1O00151 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PDLIM1O00151 AC009949.1-201ENST00000623048 1830 ntBASIC16.54■□□□□ 0.24
PDLIM1O00151 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PDLIM1O00151 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.54■□□□□ 0.24
PDLIM1O00151 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PDLIM1O00151 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.54■□□□□ 0.24
PDLIM1O00151 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM1O00151 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM1O00151 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM1O00151 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM1O00151 KRT18P23-201ENST00000435622 1283 ntBASIC16.54■□□□□ 0.24
PDLIM1O00151 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM1O00151 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
PDLIM1O00151 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM1O00151 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.54■□□□□ 0.24
PDLIM1O00151 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM1O00151 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.54■□□□□ 0.24
PDLIM1O00151 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM1O00151 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM1O00151 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.54■□□□□ 0.24
PDLIM1O00151 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM1O00151 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM1O00151 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM1O00151 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM1O00151 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PDLIM1O00151 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM1O00151 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM1O00151 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM1O00151 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.53■□□□□ 0.24
PDLIM1O00151 HOXB1-202ENST00000577092 1414 ntBASIC16.53■□□□□ 0.24
PDLIM1O00151 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.53■□□□□ 0.24
PDLIM1O00151 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM1O00151 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM1O00151 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.53■□□□□ 0.24
PDLIM1O00151 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM1O00151 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM1O00151 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM1O00151 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM1O00151 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM1O00151 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM1O00151 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM1O00151 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM1O00151 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.53■□□□□ 0.24
PDLIM1O00151 LIN28AP1-201ENST00000429574 405 ntBASIC16.53■□□□□ 0.24
PDLIM1O00151 KRT18P57-201ENST00000443599 1254 ntBASIC16.53■□□□□ 0.24
PDLIM1O00151 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM1O00151 KRT18P21-201ENST00000515767 1272 ntBASIC16.53■□□□□ 0.24
PDLIM1O00151 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.53■□□□□ 0.24
PDLIM1O00151 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.53■□□□□ 0.24
PDLIM1O00151 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.53■□□□□ 0.24
PDLIM1O00151 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms