Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.82■□□□□ 0.12
NPIPA2E9PIF3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 AL020989.1-201ENST00000422979 469 ntBASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 UNC93B6-202ENST00000528242 690 ntBASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 AC006557.2-201ENST00000592985 1240 ntBASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 AC139530.3-201ENST00000620344 690 ntBASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 AC073592.4-201ENST00000623827 446 ntBASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.81■□□□□ 0.12
NPIPA2E9PIF3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 AL049757.1-201ENST00000616842 1596 ntBASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 SIGLEC16-201ENST00000599858 1437 ntBASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 BX842568.4-201ENST00000421222 227 ntBASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 PRYP5-201ENST00000451909 266 ntBASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 AL356488.2-201ENST00000602755 427 ntBASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 AC067852.2-201ENST00000590513 2313 ntBASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPIPA2E9PIF3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPIPA2E9PIF3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms