Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 AL645608.8-201ENST00000606034 2086 ntBASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
YJEFN3A6XGL0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 AC106820.2-201ENST00000563775 3264 ntBASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 RPS15P9-201ENST00000494093 319 ntBASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 AC005593.1-201ENST00000624894 515 ntBASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 AL805961.1-202ENST00000641562 540 ntBASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
YJEFN3A6XGL0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 AP000347.1-202ENST00000435868 847 ntBASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 RPL13AP23-201ENST00000480739 586 ntBASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 RNA5SP415-201ENST00000517246 115 ntBASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 UNC93B6-202ENST00000528242 690 ntBASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
YJEFN3A6XGL0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
YJEFN3A6XGL0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
YJEFN3A6XGL0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
YJEFN3A6XGL0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.02■□□□□ 0.47
YJEFN3A6XGL0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
YJEFN3A6XGL0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
YJEFN3A6XGL0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
YJEFN3A6XGL0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
YJEFN3A6XGL0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.02■□□□□ 0.47
YJEFN3A6XGL0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
YJEFN3A6XGL0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
YJEFN3A6XGL0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
YJEFN3A6XGL0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
YJEFN3A6XGL0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
YJEFN3A6XGL0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
YJEFN3A6XGL0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
YJEFN3A6XGL0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.47
YJEFN3A6XGL0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
YJEFN3A6XGL0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms