Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PTPDC1A2A3K4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPDC1A2A3K4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.4■□□□□ 0.86
PTPDC1A2A3K4 AC018712.1-201ENST00000455767 687 ntBASIC20.4■□□□□ 0.86
PTPDC1A2A3K4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PTPDC1A2A3K4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPDC1A2A3K4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPDC1A2A3K4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.4■□□□□ 0.86
PTPDC1A2A3K4 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPDC1A2A3K4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.4■□□□□ 0.86
PTPDC1A2A3K4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.4■□□□□ 0.86
PTPDC1A2A3K4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.4■□□□□ 0.86
PTPDC1A2A3K4 AC116353.5-201ENST00000638148 1699 ntBASIC20.4■□□□□ 0.86
PTPDC1A2A3K4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPDC1A2A3K4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPDC1A2A3K4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PTPDC1A2A3K4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PTPDC1A2A3K4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPDC1A2A3K4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPDC1A2A3K4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPDC1A2A3K4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPDC1A2A3K4 AC009053.2-201ENST00000563701 2365 ntBASIC20.39■□□□□ 0.86
PTPDC1A2A3K4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PTPDC1A2A3K4 PRORSD1P-202ENST00000563365 2154 ntBASIC20.39■□□□□ 0.86
PTPDC1A2A3K4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
PTPDC1A2A3K4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PTPDC1A2A3K4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PTPDC1A2A3K4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PTPDC1A2A3K4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPDC1A2A3K4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPDC1A2A3K4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPDC1A2A3K4 IL9RP2-201ENST00000423948 1312 ntBASIC20.39■□□□□ 0.85
PTPDC1A2A3K4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPDC1A2A3K4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPDC1A2A3K4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTPDC1A2A3K4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.39■□□□□ 0.85
PTPDC1A2A3K4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.39■□□□□ 0.85
PTPDC1A2A3K4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.39■□□□□ 0.85
PTPDC1A2A3K4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.39■□□□□ 0.85
PTPDC1A2A3K4 IGHV3-52-201ENST00000519770 353 ntBASIC20.39■□□□□ 0.85
PTPDC1A2A3K4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.39■□□□□ 0.85
PTPDC1A2A3K4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.39■□□□□ 0.85
PTPDC1A2A3K4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PTPDC1A2A3K4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PTPDC1A2A3K4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPDC1A2A3K4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPDC1A2A3K4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPDC1A2A3K4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PTPDC1A2A3K4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPDC1A2A3K4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPDC1A2A3K4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPDC1A2A3K4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPDC1A2A3K4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPDC1A2A3K4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPDC1A2A3K4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.38■□□□□ 0.85
PTPDC1A2A3K4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PTPDC1A2A3K4 AC093909.1-201ENST00000504731 1122 ntBASIC20.38■□□□□ 0.85
PTPDC1A2A3K4 SART3-203ENST00000546611 1184 ntBASIC20.38■□□□□ 0.85
PTPDC1A2A3K4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.38■□□□□ 0.85
PTPDC1A2A3K4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPDC1A2A3K4 AL049840.3-201ENST00000602669 611 ntBASIC20.38■□□□□ 0.85
PTPDC1A2A3K4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PTPDC1A2A3K4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPDC1A2A3K4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.38■□□□□ 0.85
PTPDC1A2A3K4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPDC1A2A3K4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PTPDC1A2A3K4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PTPDC1A2A3K4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTPDC1A2A3K4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPDC1A2A3K4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPDC1A2A3K4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
PTPDC1A2A3K4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PTPDC1A2A3K4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PTPDC1A2A3K4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPDC1A2A3K4 MYCLP1-201ENST00000372451 1075 ntBASIC20.37■□□□□ 0.85
PTPDC1A2A3K4 SLC25A1P3-201ENST00000395415 828 ntBASIC20.37■□□□□ 0.85
PTPDC1A2A3K4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.37■□□□□ 0.85
PTPDC1A2A3K4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PTPDC1A2A3K4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.37■□□□□ 0.85
PTPDC1A2A3K4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPDC1A2A3K4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.37■□□□□ 0.85
PTPDC1A2A3K4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.37■□□□□ 0.85
PTPDC1A2A3K4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.37■□□□□ 0.85
PTPDC1A2A3K4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
PTPDC1A2A3K4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPDC1A2A3K4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PTPDC1A2A3K4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.37■□□□□ 0.85
PTPDC1A2A3K4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.37■□□□□ 0.85
PTPDC1A2A3K4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PTPDC1A2A3K4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.37■□□□□ 0.85
PTPDC1A2A3K4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PTPDC1A2A3K4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms