Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.98□□□□□ -0.17
TCRBV4S1A1TA0A5B7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AF238378.1-201ENST00000526806 358 ntBASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRBV4S1A1TA0A5B7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC005336.2-201ENST00000593183 939 ntBASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 AC008608.2-201ENST00000606089 416 ntBASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.96□□□□□ -0.17
TCRBV4S1A1TA0A5B7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TCRBV4S1A1TA0A5B7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
TCRBV4S1A1TA0A5B7 AC022211.2-201ENST00000585075 2527 ntBASIC13.96□□□□□ -0.18
TCRBV4S1A1TA0A5B7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TCRBV4S1A1TA0A5B7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
TCRBV4S1A1TA0A5B7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
TCRBV4S1A1TA0A5B7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TCRBV4S1A1TA0A5B7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
TCRBV4S1A1TA0A5B7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TCRBV4S1A1TA0A5B7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRBV4S1A1TA0A5B7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms