Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.57■□□□□ 0.56
SNX9Q9Y5X1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SNX9Q9Y5X1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNX9Q9Y5X1 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNX9Q9Y5X1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.57■□□□□ 0.56
SNX9Q9Y5X1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.57■□□□□ 0.56
SNX9Q9Y5X1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNX9Q9Y5X1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNX9Q9Y5X1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 ELK2BP-201ENST00000415014 1224 ntBASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 ACTG1P4-201ENST00000425123 1122 ntBASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 AP000347.1-202ENST00000435868 847 ntBASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 LINC00896-202ENST00000609602 2128 ntBASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNX9Q9Y5X1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 AC136632.2-201ENST00000512891 861 ntBASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 IGHV3-22-201ENST00000520721 359 ntBASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 SLC25A1P1-201ENST00000528351 927 ntBASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 AL353135.1-201ENST00000606729 504 ntBASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 AC117500.6-201ENST00000624871 588 ntBASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 AL138688.1-201ENST00000624851 1594 ntBASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.55■□□□□ 0.56
SNX9Q9Y5X1 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNX9Q9Y5X1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.53■□□□□ 0.56
SNX9Q9Y5X1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX9Q9Y5X1 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.53■□□□□ 0.56
SNX9Q9Y5X1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX9Q9Y5X1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX9Q9Y5X1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX9Q9Y5X1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNX9Q9Y5X1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX9Q9Y5X1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNX9Q9Y5X1 PCDHB18P-201ENST00000524813 2368 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms