Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 TPM4P1-201ENST00000436100 807 ntBASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 AC092119.3-201ENST00000612618 583 ntBASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHGB3Q9Y5G1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 AC096633.1-201ENST00000422446 749 ntBASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 AP002414.4-201ENST00000589764 1148 ntBASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
PCDHGB3Q9Y5G1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 MST1L-201ENST00000442552 2185 ntBASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PCDHGB3Q9Y5G1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms