Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SATB2Q9UPW6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SATB2Q9UPW6 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SATB2Q9UPW6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SATB2Q9UPW6 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SATB2Q9UPW6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SATB2Q9UPW6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SATB2Q9UPW6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SATB2Q9UPW6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SATB2Q9UPW6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
SATB2Q9UPW6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.02■□□□□ 0.32
SATB2Q9UPW6 AC023274.1-201ENST00000418278 595 ntBASIC17.02■□□□□ 0.32
SATB2Q9UPW6 AC004832.2-201ENST00000426397 482 ntBASIC17.02■□□□□ 0.32
SATB2Q9UPW6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.02■□□□□ 0.32
SATB2Q9UPW6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.02■□□□□ 0.32
SATB2Q9UPW6 AC009947.1-201ENST00000444350 727 ntBASIC17.02■□□□□ 0.32
SATB2Q9UPW6 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SATB2Q9UPW6 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.02■□□□□ 0.32
SATB2Q9UPW6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SATB2Q9UPW6 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SATB2Q9UPW6 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SATB2Q9UPW6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SATB2Q9UPW6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SATB2Q9UPW6 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SATB2Q9UPW6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SATB2Q9UPW6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.02■□□□□ 0.32
SATB2Q9UPW6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.02■□□□□ 0.31
SATB2Q9UPW6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SATB2Q9UPW6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SATB2Q9UPW6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SATB2Q9UPW6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.02■□□□□ 0.31
SATB2Q9UPW6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
SATB2Q9UPW6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SATB2Q9UPW6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.02■□□□□ 0.31
SATB2Q9UPW6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 MIR1199-201ENST00000621445 119 ntBASIC17.01■□□□□ 0.31
SATB2Q9UPW6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.01■□□□□ 0.31
SATB2Q9UPW6 AC139713.2-201ENST00000641328 2723 ntBASIC17■□□□□ 0.31
SATB2Q9UPW6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SATB2Q9UPW6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SATB2Q9UPW6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17■□□□□ 0.31
SATB2Q9UPW6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SATB2Q9UPW6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17■□□□□ 0.31
SATB2Q9UPW6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17■□□□□ 0.31
SATB2Q9UPW6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SATB2Q9UPW6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SATB2Q9UPW6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
SATB2Q9UPW6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17■□□□□ 0.31
SATB2Q9UPW6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17■□□□□ 0.31
SATB2Q9UPW6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SATB2Q9UPW6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17■□□□□ 0.31
SATB2Q9UPW6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SATB2Q9UPW6 COA5-202ENST00000409997 557 ntTSL 4 BASIC17■□□□□ 0.31
SATB2Q9UPW6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17■□□□□ 0.31
SATB2Q9UPW6 AC007967.3-201ENST00000434308 558 ntBASIC17■□□□□ 0.31
SATB2Q9UPW6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17■□□□□ 0.31
SATB2Q9UPW6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17■□□□□ 0.31
SATB2Q9UPW6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17■□□□□ 0.31
SATB2Q9UPW6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
SATB2Q9UPW6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17■□□□□ 0.31
SATB2Q9UPW6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17■□□□□ 0.31
SATB2Q9UPW6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
SATB2Q9UPW6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17■□□□□ 0.31
SATB2Q9UPW6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SATB2Q9UPW6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SATB2Q9UPW6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SATB2Q9UPW6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SATB2Q9UPW6 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17■□□□□ 0.31
SATB2Q9UPW6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms