Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CUEDC1Q9NWM3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.8■□□□□ 0.28
CUEDC1Q9NWM3 MRPL3P1-201ENST00000400109 1033 ntBASIC16.8■□□□□ 0.28
CUEDC1Q9NWM3 SPDYE21P-201ENST00000413323 827 ntBASIC16.8■□□□□ 0.28
CUEDC1Q9NWM3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.8■□□□□ 0.28
CUEDC1Q9NWM3 RBM17P3-201ENST00000417687 1192 ntBASIC16.8■□□□□ 0.28
CUEDC1Q9NWM3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.8■□□□□ 0.28
CUEDC1Q9NWM3 AC092183.1-201ENST00000469884 875 ntBASIC16.8■□□□□ 0.28
CUEDC1Q9NWM3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CUEDC1Q9NWM3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CUEDC1Q9NWM3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.8■□□□□ 0.28
CUEDC1Q9NWM3 AL355877.3-201ENST00000622820 899 ntBASIC16.8■□□□□ 0.28
CUEDC1Q9NWM3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.8■□□□□ 0.28
CUEDC1Q9NWM3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CUEDC1Q9NWM3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CUEDC1Q9NWM3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CUEDC1Q9NWM3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CUEDC1Q9NWM3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CUEDC1Q9NWM3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CUEDC1Q9NWM3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CUEDC1Q9NWM3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 AC079776.2-201ENST00000641154 1609 ntBASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 MIR574-201ENST00000385209 96 ntBASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 MIR1233-2-201ENST00000408138 82 ntBASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 MIR1233-1-201ENST00000408722 82 ntBASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 FGFR3P6-201ENST00000457012 610 ntBASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 BX005266.1-201ENST00000473402 457 ntBASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.79■□□□□ 0.28
CUEDC1Q9NWM3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 AL020989.1-201ENST00000422979 469 ntBASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CUEDC1Q9NWM3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CUEDC1Q9NWM3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms