Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.85■□□□□ 0.77
FBXO28Q9NVF7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
FBXO28Q9NVF7 AP002472.1-201ENST00000577490 586 ntBASIC19.85■□□□□ 0.77
FBXO28Q9NVF7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.85■□□□□ 0.77
FBXO28Q9NVF7 AC068137.2-201ENST00000605408 478 ntBASIC19.85■□□□□ 0.77
FBXO28Q9NVF7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.85■□□□□ 0.77
FBXO28Q9NVF7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.85■□□□□ 0.77
FBXO28Q9NVF7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.85■□□□□ 0.77
FBXO28Q9NVF7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.85■□□□□ 0.77
FBXO28Q9NVF7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
FBXO28Q9NVF7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FBXO28Q9NVF7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FBXO28Q9NVF7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FBXO28Q9NVF7 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FBXO28Q9NVF7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.85■□□□□ 0.77
FBXO28Q9NVF7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.84■□□□□ 0.77
FBXO28Q9NVF7 AL390961.4-201ENST00000623958 2535 ntBASIC19.84■□□□□ 0.77
FBXO28Q9NVF7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
FBXO28Q9NVF7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
FBXO28Q9NVF7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FBXO28Q9NVF7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.84■□□□□ 0.77
FBXO28Q9NVF7 AC107918.2-201ENST00000530817 355 ntBASIC19.84■□□□□ 0.77
FBXO28Q9NVF7 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.84■□□□□ 0.77
FBXO28Q9NVF7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.84■□□□□ 0.77
FBXO28Q9NVF7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FBXO28Q9NVF7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
FBXO28Q9NVF7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FBXO28Q9NVF7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
FBXO28Q9NVF7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FBXO28Q9NVF7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FBXO28Q9NVF7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FBXO28Q9NVF7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FBXO28Q9NVF7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FBXO28Q9NVF7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.84■□□□□ 0.77
FBXO28Q9NVF7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.84■□□□□ 0.77
FBXO28Q9NVF7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
FBXO28Q9NVF7 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FBXO28Q9NVF7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.77
FBXO28Q9NVF7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
FBXO28Q9NVF7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FBXO28Q9NVF7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FBXO28Q9NVF7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
FBXO28Q9NVF7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
FBXO28Q9NVF7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
FBXO28Q9NVF7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FBXO28Q9NVF7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
FBXO28Q9NVF7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FBXO28Q9NVF7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FBXO28Q9NVF7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FBXO28Q9NVF7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.83■□□□□ 0.77
FBXO28Q9NVF7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.83■□□□□ 0.77
FBXO28Q9NVF7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.83■□□□□ 0.77
FBXO28Q9NVF7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
FBXO28Q9NVF7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
FBXO28Q9NVF7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.83■□□□□ 0.77
FBXO28Q9NVF7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.83■□□□□ 0.77
FBXO28Q9NVF7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
FBXO28Q9NVF7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
FBXO28Q9NVF7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.83■□□□□ 0.76
FBXO28Q9NVF7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
FBXO28Q9NVF7 AC133963.1-201ENST00000504166 1679 ntBASIC19.83■□□□□ 0.76
FBXO28Q9NVF7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
FBXO28Q9NVF7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
FBXO28Q9NVF7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FBXO28Q9NVF7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
FBXO28Q9NVF7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 SLC25A6P5-201ENST00000435663 894 ntBASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FBXO28Q9NVF7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.81■□□□□ 0.76
FBXO28Q9NVF7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FBXO28Q9NVF7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FBXO28Q9NVF7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms