Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 AC009154.2-201ENST00000621177 724 ntBASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 AP000550.4-202ENST00000639755 178 ntBASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LIN7CQ9NUP9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LIN7CQ9NUP9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LIN7CQ9NUP9 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LIN7CQ9NUP9 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
LIN7CQ9NUP9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LIN7CQ9NUP9 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.46□□□□□ -0.1
LIN7CQ9NUP9 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
LIN7CQ9NUP9 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.46□□□□□ -0.1
LIN7CQ9NUP9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.46□□□□□ -0.1
LIN7CQ9NUP9 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 LYSMD4-203ENST00000378904 2122 ntBASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 IGHGP-201ENST00000390555 1178 ntBASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 GPR32P1-201ENST00000601788 811 ntBASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 AC116407.4-201ENST00000623319 1061 ntBASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 IER3-202ENST00000376377 1350 ntBASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.45□□□□□ -0.1
LIN7CQ9NUP9 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LIN7CQ9NUP9 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms