Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 BX276092.7-203ENST00000637198 1536 ntBASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHB16Q9NRJ7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 LIN28AP1-201ENST00000429574 405 ntBASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 KRT18P48-201ENST00000434763 852 ntBASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 AC133561.5-201ENST00000635547 218 ntBASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 KRT8P9-201ENST00000558927 1449 ntBASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 AC016396.2-201ENST00000562575 1417 ntBASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHB16Q9NRJ7 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.02
PCDHB16Q9NRJ7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 DOC2GP-204ENST00000639052 2548 ntBASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 TSPY12P-201ENST00000421279 868 ntBASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHB16Q9NRJ7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms